Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CMSS1Q9BQ75 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CMSS1Q9BQ75 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.92□□□□□ -0.02
CMSS1Q9BQ75 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CMSS1Q9BQ75 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CMSS1Q9BQ75 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CMSS1Q9BQ75 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CMSS1Q9BQ75 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CMSS1Q9BQ75 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CMSS1Q9BQ75 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CMSS1Q9BQ75 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.92□□□□□ -0.02
CMSS1Q9BQ75 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CMSS1Q9BQ75 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CMSS1Q9BQ75 BX276092.7-203ENST00000637198 1536 ntBASIC14.92□□□□□ -0.02
CMSS1Q9BQ75 KRT8P9-201ENST00000558927 1449 ntBASIC14.92□□□□□ -0.02
CMSS1Q9BQ75 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CMSS1Q9BQ75 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
CMSS1Q9BQ75 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
CMSS1Q9BQ75 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CMSS1Q9BQ75 MMP23A-201ENST00000234610 1017 ntBASIC14.91□□□□□ -0.02
CMSS1Q9BQ75 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CMSS1Q9BQ75 CRAT-202ENST00000393384 973 ntTSL 2 BASIC14.91□□□□□ -0.02
CMSS1Q9BQ75 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CMSS1Q9BQ75 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC14.91□□□□□ -0.02
CMSS1Q9BQ75 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC14.91□□□□□ -0.02
CMSS1Q9BQ75 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CMSS1Q9BQ75 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CMSS1Q9BQ75 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CMSS1Q9BQ75 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CMSS1Q9BQ75 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC14.91□□□□□ -0.02
CMSS1Q9BQ75 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CMSS1Q9BQ75 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC14.91□□□□□ -0.02
CMSS1Q9BQ75 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.91□□□□□ -0.02
CMSS1Q9BQ75 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.91□□□□□ -0.02
CMSS1Q9BQ75 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CMSS1Q9BQ75 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CMSS1Q9BQ75 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.91□□□□□ -0.02
CMSS1Q9BQ75 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CMSS1Q9BQ75 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CMSS1Q9BQ75 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CMSS1Q9BQ75 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CMSS1Q9BQ75 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.91□□□□□ -0.02
CMSS1Q9BQ75 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CMSS1Q9BQ75 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CMSS1Q9BQ75 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CMSS1Q9BQ75 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CMSS1Q9BQ75 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CMSS1Q9BQ75 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
CMSS1Q9BQ75 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CMSS1Q9BQ75 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.9□□□□□ -0.02
CMSS1Q9BQ75 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.9□□□□□ -0.02
CMSS1Q9BQ75 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CMSS1Q9BQ75 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CMSS1Q9BQ75 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CMSS1Q9BQ75 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CMSS1Q9BQ75 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CMSS1Q9BQ75 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CMSS1Q9BQ75 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CMSS1Q9BQ75 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CMSS1Q9BQ75 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CMSS1Q9BQ75 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CMSS1Q9BQ75 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CMSS1Q9BQ75 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CMSS1Q9BQ75 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CMSS1Q9BQ75 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC14.9□□□□□ -0.02
CMSS1Q9BQ75 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.9□□□□□ -0.02
CMSS1Q9BQ75 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC14.9□□□□□ -0.02
CMSS1Q9BQ75 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CMSS1Q9BQ75 ECEL1P3-201ENST00000427961 737 ntBASIC14.9□□□□□ -0.02
CMSS1Q9BQ75 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CMSS1Q9BQ75 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC14.9□□□□□ -0.02
CMSS1Q9BQ75 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CMSS1Q9BQ75 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC14.9□□□□□ -0.02
CMSS1Q9BQ75 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC14.9□□□□□ -0.02
CMSS1Q9BQ75 CLN6-221ENST00000637494 765 ntTSL 5 BASIC14.9□□□□□ -0.02
CMSS1Q9BQ75 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CMSS1Q9BQ75 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CMSS1Q9BQ75 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CMSS1Q9BQ75 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CMSS1Q9BQ75 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CMSS1Q9BQ75 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CMSS1Q9BQ75 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CMSS1Q9BQ75 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
CMSS1Q9BQ75 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CMSS1Q9BQ75 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CMSS1Q9BQ75 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CMSS1Q9BQ75 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CMSS1Q9BQ75 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
CMSS1Q9BQ75 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CMSS1Q9BQ75 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CMSS1Q9BQ75 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.9□□□□□ -0.02
CMSS1Q9BQ75 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.9□□□□□ -0.02
CMSS1Q9BQ75 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CMSS1Q9BQ75 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CMSS1Q9BQ75 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.89□□□□□ -0.03
CMSS1Q9BQ75 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CMSS1Q9BQ75 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC14.89□□□□□ -0.03
CMSS1Q9BQ75 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CMSS1Q9BQ75 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CMSS1Q9BQ75 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms