Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDNQ99608 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDNQ99608 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.47■□□□□ 0.39
NDNQ99608 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NDNQ99608 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDNQ99608 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDNQ99608 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDNQ99608 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDNQ99608 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.47■□□□□ 0.39
NDNQ99608 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.47■□□□□ 0.39
NDNQ99608 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDNQ99608 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDNQ99608 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
NDNQ99608 FLJ38576-201ENST00000623820 2459 ntBASIC17.46■□□□□ 0.39
NDNQ99608 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
NDNQ99608 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDNQ99608 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NDNQ99608 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDNQ99608 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDNQ99608 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDNQ99608 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDNQ99608 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDNQ99608 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDNQ99608 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NDNQ99608 COX5BP2-201ENST00000392354 334 ntBASIC17.46■□□□□ 0.39
NDNQ99608 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.46■□□□□ 0.39
NDNQ99608 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.46■□□□□ 0.39
NDNQ99608 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.46■□□□□ 0.39
NDNQ99608 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
NDNQ99608 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
NDNQ99608 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.46■□□□□ 0.39
NDNQ99608 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.46■□□□□ 0.39
NDNQ99608 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDNQ99608 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.46■□□□□ 0.39
NDNQ99608 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.46■□□□□ 0.39
NDNQ99608 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDNQ99608 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDNQ99608 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDNQ99608 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.46■□□□□ 0.39
NDNQ99608 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.46■□□□□ 0.39
NDNQ99608 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.46■□□□□ 0.39
NDNQ99608 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.46■□□□□ 0.39
NDNQ99608 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDNQ99608 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDNQ99608 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
NDNQ99608 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
NDNQ99608 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.46■□□□□ 0.38
NDNQ99608 AC005332.1-201ENST00000577698 1310 ntBASIC17.46■□□□□ 0.38
NDNQ99608 AC097374.2-201ENST00000618617 1306 ntBASIC17.46■□□□□ 0.38
NDNQ99608 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
NDNQ99608 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
NDNQ99608 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDNQ99608 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDNQ99608 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NDNQ99608 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NDNQ99608 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.45■□□□□ 0.38
NDNQ99608 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
NDNQ99608 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.45■□□□□ 0.38
NDNQ99608 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.45■□□□□ 0.38
NDNQ99608 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.45■□□□□ 0.38
NDNQ99608 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDNQ99608 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NDNQ99608 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.45■□□□□ 0.38
NDNQ99608 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
NDNQ99608 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NDNQ99608 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.45■□□□□ 0.38
NDNQ99608 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.45■□□□□ 0.38
NDNQ99608 KRT8P26-201ENST00000534154 1276 ntBASIC17.45■□□□□ 0.38
NDNQ99608 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.45■□□□□ 0.38
NDNQ99608 AC090616.6-201ENST00000582640 721 ntBASIC17.45■□□□□ 0.38
NDNQ99608 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.38
NDNQ99608 AC005336.2-201ENST00000593183 939 ntBASIC17.45■□□□□ 0.38
NDNQ99608 AL121956.5-201ENST00000625261 221 ntBASIC17.45■□□□□ 0.38
NDNQ99608 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.45■□□□□ 0.38
NDNQ99608 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NDNQ99608 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.45■□□□□ 0.38
NDNQ99608 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDNQ99608 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
NDNQ99608 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.45■□□□□ 0.38
NDNQ99608 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDNQ99608 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
NDNQ99608 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.45■□□□□ 0.38
NDNQ99608 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.45■□□□□ 0.38
NDNQ99608 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDNQ99608 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDNQ99608 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDNQ99608 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
NDNQ99608 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
NDNQ99608 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDNQ99608 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDNQ99608 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
NDNQ99608 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.44■□□□□ 0.38
NDNQ99608 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.44■□□□□ 0.38
NDNQ99608 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NDNQ99608 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NDNQ99608 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.44■□□□□ 0.38
NDNQ99608 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.44■□□□□ 0.38
NDNQ99608 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NDNQ99608 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
NDNQ99608 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms