Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CRAMP1Q96RY5 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CRAMP1Q96RY5 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC21.07■□□□□ 0.96
CRAMP1Q96RY5 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CRAMP1Q96RY5 RAB34-224ENST00000636513 888 ntTSL 5 BASIC21.07■□□□□ 0.96
CRAMP1Q96RY5 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CRAMP1Q96RY5 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CRAMP1Q96RY5 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CRAMP1Q96RY5 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CRAMP1Q96RY5 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CRAMP1Q96RY5 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CRAMP1Q96RY5 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CRAMP1Q96RY5 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CRAMP1Q96RY5 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC21.06■□□□□ 0.96
CRAMP1Q96RY5 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CRAMP1Q96RY5 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
CRAMP1Q96RY5 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CRAMP1Q96RY5 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CRAMP1Q96RY5 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CRAMP1Q96RY5 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CRAMP1Q96RY5 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC21.06■□□□□ 0.96
CRAMP1Q96RY5 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CRAMP1Q96RY5 VMA21-202ENST00000370361 693 ntTSL 5 BASIC21.06■□□□□ 0.96
CRAMP1Q96RY5 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CRAMP1Q96RY5 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CRAMP1Q96RY5 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CRAMP1Q96RY5 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CRAMP1Q96RY5 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC21.06■□□□□ 0.96
CRAMP1Q96RY5 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CRAMP1Q96RY5 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC21.06■□□□□ 0.96
CRAMP1Q96RY5 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CRAMP1Q96RY5 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC21.06■□□□□ 0.96
CRAMP1Q96RY5 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CRAMP1Q96RY5 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CRAMP1Q96RY5 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CRAMP1Q96RY5 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC21.06■□□□□ 0.96
CRAMP1Q96RY5 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CRAMP1Q96RY5 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CRAMP1Q96RY5 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CRAMP1Q96RY5 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CRAMP1Q96RY5 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
CRAMP1Q96RY5 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CRAMP1Q96RY5 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CRAMP1Q96RY5 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC21.05■□□□□ 0.96
CRAMP1Q96RY5 PODN-203ENST00000395871 2744 ntTSL 5 BASIC21.05■□□□□ 0.96
CRAMP1Q96RY5 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CRAMP1Q96RY5 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CRAMP1Q96RY5 WRB-204ENST00000398753 699 ntTSL 3 BASIC21.05■□□□□ 0.96
CRAMP1Q96RY5 AC107890.1-201ENST00000422478 521 ntBASIC21.05■□□□□ 0.96
CRAMP1Q96RY5 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC21.05■□□□□ 0.96
CRAMP1Q96RY5 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC21.05■□□□□ 0.96
CRAMP1Q96RY5 AC109635.5-201ENST00000533593 962 ntBASIC21.05■□□□□ 0.96
CRAMP1Q96RY5 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CRAMP1Q96RY5 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC21.05■□□□□ 0.96
CRAMP1Q96RY5 NAA60-208ENST00000570819 833 ntTSL 2 BASIC21.05■□□□□ 0.96
CRAMP1Q96RY5 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC21.05■□□□□ 0.96
CRAMP1Q96RY5 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CRAMP1Q96RY5 AF228730.6-201ENST00000641497 218 ntBASIC21.05■□□□□ 0.96
CRAMP1Q96RY5 AC084121.3-201ENST00000641716 218 ntBASIC21.05■□□□□ 0.96
CRAMP1Q96RY5 AC105233.6-201ENST00000642093 218 ntBASIC21.05■□□□□ 0.96
CRAMP1Q96RY5 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CRAMP1Q96RY5 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CRAMP1Q96RY5 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CRAMP1Q96RY5 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CRAMP1Q96RY5 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CRAMP1Q96RY5 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
CRAMP1Q96RY5 LINC00304-203ENST00000565008 1864 ntBASIC21.05■□□□□ 0.96
CRAMP1Q96RY5 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CRAMP1Q96RY5 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CRAMP1Q96RY5 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CRAMP1Q96RY5 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC21.04■□□□□ 0.96
CRAMP1Q96RY5 AC012569.1-201ENST00000591191 1524 ntBASIC21.04■□□□□ 0.96
CRAMP1Q96RY5 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CRAMP1Q96RY5 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC21.04■□□□□ 0.96
CRAMP1Q96RY5 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.04■□□□□ 0.96
CRAMP1Q96RY5 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CRAMP1Q96RY5 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC21.04■□□□□ 0.96
CRAMP1Q96RY5 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC21.04■□□□□ 0.96
CRAMP1Q96RY5 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CRAMP1Q96RY5 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC21.04■□□□□ 0.96
CRAMP1Q96RY5 AC244107.1-201ENST00000442033 332 ntBASIC21.04■□□□□ 0.96
CRAMP1Q96RY5 AC026150.2-201ENST00000564693 1156 ntBASIC21.04■□□□□ 0.96
CRAMP1Q96RY5 AC140878.1-201ENST00000565277 250 ntBASIC21.04■□□□□ 0.96
CRAMP1Q96RY5 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC21.04■□□□□ 0.96
CRAMP1Q96RY5 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CRAMP1Q96RY5 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CRAMP1Q96RY5 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC21.04■□□□□ 0.96
CRAMP1Q96RY5 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CRAMP1Q96RY5 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
CRAMP1Q96RY5 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC21.04■□□□□ 0.96
CRAMP1Q96RY5 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CRAMP1Q96RY5 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CRAMP1Q96RY5 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CRAMP1Q96RY5 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
CRAMP1Q96RY5 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CRAMP1Q96RY5 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CRAMP1Q96RY5 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CRAMP1Q96RY5 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CRAMP1Q96RY5 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CRAMP1Q96RY5 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms