Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
NR1H4Q96RI1 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NR1H4Q96RI1 AL163051.1-201ENST00000569214 1512 ntBASIC16.4■□□□□ 0.22
NR1H4Q96RI1 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NR1H4Q96RI1 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.4■□□□□ 0.22
NR1H4Q96RI1 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.39■□□□□ 0.22
NR1H4Q96RI1 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.39■□□□□ 0.21
NR1H4Q96RI1 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NR1H4Q96RI1 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
NR1H4Q96RI1 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NR1H4Q96RI1 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NR1H4Q96RI1 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NR1H4Q96RI1 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NR1H4Q96RI1 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NR1H4Q96RI1 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
NR1H4Q96RI1 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NR1H4Q96RI1 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NR1H4Q96RI1 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
NR1H4Q96RI1 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NR1H4Q96RI1 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.39■□□□□ 0.21
NR1H4Q96RI1 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.39■□□□□ 0.21
NR1H4Q96RI1 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.39■□□□□ 0.21
NR1H4Q96RI1 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NR1H4Q96RI1 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NR1H4Q96RI1 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
NR1H4Q96RI1 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
NR1H4Q96RI1 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
NR1H4Q96RI1 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.39■□□□□ 0.21
NR1H4Q96RI1 SLC29A4P2-201ENST00000504749 1089 ntBASIC16.39■□□□□ 0.21
NR1H4Q96RI1 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.39■□□□□ 0.21
NR1H4Q96RI1 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.39■□□□□ 0.21
NR1H4Q96RI1 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.39■□□□□ 0.21
NR1H4Q96RI1 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NR1H4Q96RI1 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NR1H4Q96RI1 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NR1H4Q96RI1 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
NR1H4Q96RI1 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NR1H4Q96RI1 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NR1H4Q96RI1 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NR1H4Q96RI1 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NR1H4Q96RI1 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
NR1H4Q96RI1 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NR1H4Q96RI1 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NR1H4Q96RI1 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NR1H4Q96RI1 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
NR1H4Q96RI1 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
NR1H4Q96RI1 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
NR1H4Q96RI1 AC034236.2-201ENST00000606662 1610 ntBASIC16.38■□□□□ 0.21
NR1H4Q96RI1 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.38■□□□□ 0.21
NR1H4Q96RI1 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NR1H4Q96RI1 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NR1H4Q96RI1 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
NR1H4Q96RI1 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
NR1H4Q96RI1 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
NR1H4Q96RI1 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NR1H4Q96RI1 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.38■□□□□ 0.21
NR1H4Q96RI1 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NR1H4Q96RI1 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.38■□□□□ 0.21
NR1H4Q96RI1 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.38■□□□□ 0.21
NR1H4Q96RI1 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.38■□□□□ 0.21
NR1H4Q96RI1 AC083880.1-201ENST00000608266 535 ntBASIC16.38■□□□□ 0.21
NR1H4Q96RI1 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
NR1H4Q96RI1 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NR1H4Q96RI1 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NR1H4Q96RI1 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.38■□□□□ 0.21
NR1H4Q96RI1 AC022532.1-201ENST00000624563 1728 ntBASIC16.38■□□□□ 0.21
NR1H4Q96RI1 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
NR1H4Q96RI1 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
NR1H4Q96RI1 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NR1H4Q96RI1 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.38■□□□□ 0.21
NR1H4Q96RI1 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NR1H4Q96RI1 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NR1H4Q96RI1 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NR1H4Q96RI1 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NR1H4Q96RI1 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NR1H4Q96RI1 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
NR1H4Q96RI1 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NR1H4Q96RI1 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.37■□□□□ 0.21
NR1H4Q96RI1 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NR1H4Q96RI1 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
NR1H4Q96RI1 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NR1H4Q96RI1 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.37■□□□□ 0.21
NR1H4Q96RI1 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.37■□□□□ 0.21
NR1H4Q96RI1 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
NR1H4Q96RI1 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NR1H4Q96RI1 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
NR1H4Q96RI1 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NR1H4Q96RI1 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NR1H4Q96RI1 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
NR1H4Q96RI1 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NR1H4Q96RI1 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.37■□□□□ 0.21
NR1H4Q96RI1 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NR1H4Q96RI1 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NR1H4Q96RI1 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
NR1H4Q96RI1 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NR1H4Q96RI1 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
NR1H4Q96RI1 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.37■□□□□ 0.21
NR1H4Q96RI1 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NR1H4Q96RI1 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.37■□□□□ 0.21
NR1H4Q96RI1 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms