Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LMO3Q8TAP4 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LMO3Q8TAP4 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.58■□□□□ 0.56
LMO3Q8TAP4 PRELID1P1-202ENST00000567272 903 ntBASIC18.58■□□□□ 0.56
LMO3Q8TAP4 MTDHP3-201ENST00000594186 672 ntBASIC18.58■□□□□ 0.56
LMO3Q8TAP4 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.58■□□□□ 0.56
LMO3Q8TAP4 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LMO3Q8TAP4 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.58■□□□□ 0.56
LMO3Q8TAP4 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LMO3Q8TAP4 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.58■□□□□ 0.56
LMO3Q8TAP4 GPR89P-201ENST00000407924 1495 ntBASIC18.58■□□□□ 0.56
LMO3Q8TAP4 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
LMO3Q8TAP4 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LMO3Q8TAP4 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.58■□□□□ 0.56
LMO3Q8TAP4 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
LMO3Q8TAP4 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LMO3Q8TAP4 AC005915.1-201ENST00000624912 2018 ntBASIC18.57■□□□□ 0.56
LMO3Q8TAP4 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.57■□□□□ 0.56
LMO3Q8TAP4 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LMO3Q8TAP4 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
LMO3Q8TAP4 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.57■□□□□ 0.56
LMO3Q8TAP4 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.57■□□□□ 0.56
LMO3Q8TAP4 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LMO3Q8TAP4 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.57■□□□□ 0.56
LMO3Q8TAP4 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LMO3Q8TAP4 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
LMO3Q8TAP4 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
LMO3Q8TAP4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.57■□□□□ 0.56
LMO3Q8TAP4 UNC93B7-201ENST00000509439 705 ntBASIC18.57■□□□□ 0.56
LMO3Q8TAP4 AF238378.1-201ENST00000526806 358 ntBASIC18.57■□□□□ 0.56
LMO3Q8TAP4 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.57■□□□□ 0.56
LMO3Q8TAP4 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.57■□□□□ 0.56
LMO3Q8TAP4 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
LMO3Q8TAP4 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
LMO3Q8TAP4 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LMO3Q8TAP4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.57■□□□□ 0.56
LMO3Q8TAP4 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LMO3Q8TAP4 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LMO3Q8TAP4 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LMO3Q8TAP4 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LMO3Q8TAP4 AL356309.3-201ENST00000624132 1934 ntBASIC18.57■□□□□ 0.56
LMO3Q8TAP4 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.57■□□□□ 0.56
LMO3Q8TAP4 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LMO3Q8TAP4 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
LMO3Q8TAP4 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LMO3Q8TAP4 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LMO3Q8TAP4 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.56■□□□□ 0.56
LMO3Q8TAP4 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.56■□□□□ 0.56
LMO3Q8TAP4 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LMO3Q8TAP4 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LMO3Q8TAP4 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LMO3Q8TAP4 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.56■□□□□ 0.56
LMO3Q8TAP4 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LMO3Q8TAP4 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.56■□□□□ 0.56
LMO3Q8TAP4 SART3-203ENST00000546611 1184 ntBASIC18.56■□□□□ 0.56
LMO3Q8TAP4 DUX4L17-201ENST00000557360 1267 ntBASIC18.56■□□□□ 0.56
LMO3Q8TAP4 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
LMO3Q8TAP4 AC064862.7-201ENST00000604520 867 ntBASIC18.56■□□□□ 0.56
LMO3Q8TAP4 AL139288.1-201ENST00000623748 933 ntBASIC18.56■□□□□ 0.56
LMO3Q8TAP4 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.56■□□□□ 0.56
LMO3Q8TAP4 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LMO3Q8TAP4 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LMO3Q8TAP4 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
LMO3Q8TAP4 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.56■□□□□ 0.56
LMO3Q8TAP4 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LMO3Q8TAP4 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.56■□□□□ 0.56
LMO3Q8TAP4 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LMO3Q8TAP4 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LMO3Q8TAP4 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LMO3Q8TAP4 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
LMO3Q8TAP4 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LMO3Q8TAP4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LMO3Q8TAP4 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LMO3Q8TAP4 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
LMO3Q8TAP4 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LMO3Q8TAP4 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
LMO3Q8TAP4 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LMO3Q8TAP4 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LMO3Q8TAP4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LMO3Q8TAP4 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LMO3Q8TAP4 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.55■□□□□ 0.56
LMO3Q8TAP4 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LMO3Q8TAP4 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
LMO3Q8TAP4 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
LMO3Q8TAP4 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LMO3Q8TAP4 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LMO3Q8TAP4 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LMO3Q8TAP4 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.55■□□□□ 0.56
LMO3Q8TAP4 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LMO3Q8TAP4 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.55■□□□□ 0.56
LMO3Q8TAP4 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LMO3Q8TAP4 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
LMO3Q8TAP4 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LMO3Q8TAP4 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.55■□□□□ 0.56
LMO3Q8TAP4 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LMO3Q8TAP4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
LMO3Q8TAP4 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.55■□□□□ 0.56
LMO3Q8TAP4 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.55■□□□□ 0.56
LMO3Q8TAP4 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LMO3Q8TAP4 KRT18P56-201ENST00000507275 550 ntBASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms