Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HIPK4Q8NE63 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HIPK4Q8NE63 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HIPK4Q8NE63 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HIPK4Q8NE63 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HIPK4Q8NE63 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HIPK4Q8NE63 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HIPK4Q8NE63 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
HIPK4Q8NE63 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HIPK4Q8NE63 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
HIPK4Q8NE63 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.94■□□□□ 0.3
HIPK4Q8NE63 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.94■□□□□ 0.3
HIPK4Q8NE63 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.94■□□□□ 0.3
HIPK4Q8NE63 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
HIPK4Q8NE63 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.94■□□□□ 0.3
HIPK4Q8NE63 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.94■□□□□ 0.3
HIPK4Q8NE63 Z99916.2-201ENST00000604037 246 ntBASIC16.94■□□□□ 0.3
HIPK4Q8NE63 AC116562.4-202ENST00000641738 218 ntBASIC16.94■□□□□ 0.3
HIPK4Q8NE63 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HIPK4Q8NE63 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
HIPK4Q8NE63 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HIPK4Q8NE63 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
HIPK4Q8NE63 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
HIPK4Q8NE63 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HIPK4Q8NE63 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
HIPK4Q8NE63 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HIPK4Q8NE63 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HIPK4Q8NE63 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HIPK4Q8NE63 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
HIPK4Q8NE63 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIPK4Q8NE63 AC092171.3-201ENST00000610122 2651 ntBASIC16.93■□□□□ 0.3
HIPK4Q8NE63 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
HIPK4Q8NE63 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIPK4Q8NE63 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.93■□□□□ 0.3
HIPK4Q8NE63 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIPK4Q8NE63 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIPK4Q8NE63 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
HIPK4Q8NE63 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIPK4Q8NE63 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HIPK4Q8NE63 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.93■□□□□ 0.3
HIPK4Q8NE63 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIPK4Q8NE63 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.93■□□□□ 0.3
HIPK4Q8NE63 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HIPK4Q8NE63 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.93■□□□□ 0.3
HIPK4Q8NE63 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.93■□□□□ 0.3
HIPK4Q8NE63 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.93■□□□□ 0.3
HIPK4Q8NE63 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HIPK4Q8NE63 DUTP2-201ENST00000519164 463 ntBASIC16.93■□□□□ 0.3
HIPK4Q8NE63 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.93■□□□□ 0.3
HIPK4Q8NE63 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIPK4Q8NE63 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.93■□□□□ 0.3
HIPK4Q8NE63 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.93■□□□□ 0.3
HIPK4Q8NE63 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIPK4Q8NE63 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HIPK4Q8NE63 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.93■□□□□ 0.3
HIPK4Q8NE63 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIPK4Q8NE63 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.93■□□□□ 0.3
HIPK4Q8NE63 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
HIPK4Q8NE63 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIPK4Q8NE63 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIPK4Q8NE63 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
HIPK4Q8NE63 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIPK4Q8NE63 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIPK4Q8NE63 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIPK4Q8NE63 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HIPK4Q8NE63 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIPK4Q8NE63 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
HIPK4Q8NE63 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIPK4Q8NE63 REXO1L11P-201ENST00000620964 1927 ntBASIC16.92■□□□□ 0.3
HIPK4Q8NE63 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIPK4Q8NE63 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.92■□□□□ 0.3
HIPK4Q8NE63 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIPK4Q8NE63 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIPK4Q8NE63 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HIPK4Q8NE63 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIPK4Q8NE63 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIPK4Q8NE63 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIPK4Q8NE63 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HIPK4Q8NE63 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.92■□□□□ 0.3
HIPK4Q8NE63 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
HIPK4Q8NE63 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.92■□□□□ 0.3
HIPK4Q8NE63 FITM1-202ENST00000559294 800 ntBASIC16.92■□□□□ 0.3
HIPK4Q8NE63 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.92■□□□□ 0.3
HIPK4Q8NE63 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIPK4Q8NE63 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
HIPK4Q8NE63 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.92■□□□□ 0.3
HIPK4Q8NE63 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIPK4Q8NE63 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.92■□□□□ 0.3
HIPK4Q8NE63 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.92■□□□□ 0.3
HIPK4Q8NE63 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.92■□□□□ 0.3
HIPK4Q8NE63 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.92■□□□□ 0.3
HIPK4Q8NE63 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIPK4Q8NE63 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HIPK4Q8NE63 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIPK4Q8NE63 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.91■□□□□ 0.3
HIPK4Q8NE63 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HIPK4Q8NE63 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.91■□□□□ 0.3
HIPK4Q8NE63 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIPK4Q8NE63 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HIPK4Q8NE63 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms