Protein–RNA interactions for Protein: Q86XW9

NME9, Thioredoxin domain-containing protein 6, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME9Q86XW9 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
NME9Q86XW9 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
NME9Q86XW9 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC23.28■■□□□ 1.32
NME9Q86XW9 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC23.28■■□□□ 1.32
NME9Q86XW9 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NME9Q86XW9 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC23.28■■□□□ 1.32
NME9Q86XW9 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC23.28■■□□□ 1.32
NME9Q86XW9 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
NME9Q86XW9 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
NME9Q86XW9 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC23.28■■□□□ 1.32
NME9Q86XW9 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC23.28■■□□□ 1.32
NME9Q86XW9 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
NME9Q86XW9 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC23.28■■□□□ 1.32
NME9Q86XW9 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC23.28■■□□□ 1.32
NME9Q86XW9 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC23.28■■□□□ 1.32
NME9Q86XW9 AC004835.2-201ENST00000603762 682 ntBASIC23.28■■□□□ 1.32
NME9Q86XW9 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC23.28■■□□□ 1.32
NME9Q86XW9 AL121761.2-201ENST00000598007 1648 ntBASIC23.28■■□□□ 1.32
NME9Q86XW9 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NME9Q86XW9 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
NME9Q86XW9 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
NME9Q86XW9 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NME9Q86XW9 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC23.28■■□□□ 1.32
NME9Q86XW9 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NME9Q86XW9 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
NME9Q86XW9 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
NME9Q86XW9 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
NME9Q86XW9 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
NME9Q86XW9 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
NME9Q86XW9 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NME9Q86XW9 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
NME9Q86XW9 CBR1-202ENST00000399191 838 ntTSL 3 BASIC23.27■■□□□ 1.32
NME9Q86XW9 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC23.27■■□□□ 1.32
NME9Q86XW9 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC23.27■■□□□ 1.32
NME9Q86XW9 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC23.27■■□□□ 1.32
NME9Q86XW9 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
NME9Q86XW9 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC23.27■■□□□ 1.32
NME9Q86XW9 RPL28-205ENST00000558131 444 ntTSL 5 BASIC23.27■■□□□ 1.32
NME9Q86XW9 AC093520.2-201ENST00000561830 333 ntBASIC23.27■■□□□ 1.32
NME9Q86XW9 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
NME9Q86XW9 ORC5-208ENST00000626700 344 ntTSL 3 BASIC23.27■■□□□ 1.32
NME9Q86XW9 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NME9Q86XW9 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
NME9Q86XW9 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC23.27■■□□□ 1.32
NME9Q86XW9 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC23.27■■□□□ 1.32
NME9Q86XW9 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC23.27■■□□□ 1.31
NME9Q86XW9 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC23.27■■□□□ 1.31
NME9Q86XW9 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC23.26■■□□□ 1.31
NME9Q86XW9 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
NME9Q86XW9 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC23.26■■□□□ 1.31
NME9Q86XW9 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
NME9Q86XW9 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC23.26■■□□□ 1.31
NME9Q86XW9 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
NME9Q86XW9 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
NME9Q86XW9 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
NME9Q86XW9 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC23.26■■□□□ 1.31
NME9Q86XW9 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
NME9Q86XW9 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
NME9Q86XW9 AC109322.1-201ENST00000524499 1264 ntBASIC23.26■■□□□ 1.31
NME9Q86XW9 MMP17-203ENST00000535004 719 ntTSL 3 BASIC23.26■■□□□ 1.31
NME9Q86XW9 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC23.26■■□□□ 1.31
NME9Q86XW9 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC23.26■■□□□ 1.31
NME9Q86XW9 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
NME9Q86XW9 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC23.26■■□□□ 1.31
NME9Q86XW9 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC23.26■■□□□ 1.31
NME9Q86XW9 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
NME9Q86XW9 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
NME9Q86XW9 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC23.25■■□□□ 1.31
NME9Q86XW9 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC23.25■■□□□ 1.31
NME9Q86XW9 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC23.25■■□□□ 1.31
NME9Q86XW9 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NME9Q86XW9 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
NME9Q86XW9 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC23.25■■□□□ 1.31
NME9Q86XW9 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC23.25■■□□□ 1.31
NME9Q86XW9 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
NME9Q86XW9 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
NME9Q86XW9 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NME9Q86XW9 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC23.25■■□□□ 1.31
NME9Q86XW9 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC23.25■■□□□ 1.31
NME9Q86XW9 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC23.25■■□□□ 1.31
NME9Q86XW9 NMU-203ENST00000507338 658 ntTSL 3 BASIC23.25■■□□□ 1.31
NME9Q86XW9 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC23.25■■□□□ 1.31
NME9Q86XW9 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
NME9Q86XW9 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
NME9Q86XW9 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NME9Q86XW9 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NME9Q86XW9 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
NME9Q86XW9 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NME9Q86XW9 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NME9Q86XW9 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
NME9Q86XW9 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC23.25■■□□□ 1.31
NME9Q86XW9 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC23.25■■□□□ 1.31
NME9Q86XW9 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
NME9Q86XW9 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC23.24■■□□□ 1.31
NME9Q86XW9 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
NME9Q86XW9 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
NME9Q86XW9 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
NME9Q86XW9 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
NME9Q86XW9 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
NME9Q86XW9 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms