Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC002056.1-201ENST00000395613 760 ntBASIC14.34□□□□□ -0.11
VPS13CQ709C8 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.34□□□□□ -0.11
VPS13CQ709C8 LINC00896-202ENST00000609602 2128 ntBASIC14.34□□□□□ -0.11
VPS13CQ709C8 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.34□□□□□ -0.11
VPS13CQ709C8 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
VPS13CQ709C8 CD276-203ENST00000537340 2439 ntTSL 2 BASIC14.34□□□□□ -0.11
VPS13CQ709C8 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS13CQ709C8 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
VPS13CQ709C8 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS13CQ709C8 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
VPS13CQ709C8 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
VPS13CQ709C8 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
VPS13CQ709C8 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
VPS13CQ709C8 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
VPS13CQ709C8 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.33□□□□□ -0.11
VPS13CQ709C8 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.33□□□□□ -0.11
VPS13CQ709C8 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.33□□□□□ -0.11
VPS13CQ709C8 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.33□□□□□ -0.11
VPS13CQ709C8 AC079140.1-201ENST00000508039 487 ntBASIC14.33□□□□□ -0.11
VPS13CQ709C8 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.33□□□□□ -0.11
VPS13CQ709C8 AC022144.1-201ENST00000602255 1580 ntBASIC14.33□□□□□ -0.12
VPS13CQ709C8 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
VPS13CQ709C8 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC14.33□□□□□ -0.12
VPS13CQ709C8 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VPS13CQ709C8 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VPS13CQ709C8 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VPS13CQ709C8 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
VPS13CQ709C8 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VPS13CQ709C8 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.33□□□□□ -0.12
VPS13CQ709C8 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VPS13CQ709C8 AL390754.1-201ENST00000619088 582 ntBASIC14.33□□□□□ -0.12
VPS13CQ709C8 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC14.33□□□□□ -0.12
VPS13CQ709C8 AL135999.2-201ENST00000622438 1686 ntBASIC14.33□□□□□ -0.12
VPS13CQ709C8 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
VPS13CQ709C8 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VPS13CQ709C8 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
VPS13CQ709C8 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC14.33□□□□□ -0.12
VPS13CQ709C8 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VPS13CQ709C8 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
VPS13CQ709C8 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
VPS13CQ709C8 AC007613.1-201ENST00000572811 2597 ntBASIC14.33□□□□□ -0.12
VPS13CQ709C8 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VPS13CQ709C8 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VPS13CQ709C8 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC14.33□□□□□ -0.12
VPS13CQ709C8 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.33□□□□□ -0.12
VPS13CQ709C8 IGHV3-72-202ENST00000621503 303 ntBASIC14.33□□□□□ -0.12
VPS13CQ709C8 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VPS13CQ709C8 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
VPS13CQ709C8 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VPS13CQ709C8 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VPS13CQ709C8 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
VPS13CQ709C8 MIR1909-201ENST00000411312 80 ntBASIC14.32□□□□□ -0.12
VPS13CQ709C8 AC245100.3-201ENST00000441281 285 ntBASIC14.32□□□□□ -0.12
VPS13CQ709C8 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VPS13CQ709C8 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.32□□□□□ -0.12
VPS13CQ709C8 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VPS13CQ709C8 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VPS13CQ709C8 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.32□□□□□ -0.12
VPS13CQ709C8 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
VPS13CQ709C8 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
VPS13CQ709C8 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VPS13CQ709C8 COX5BP8-201ENST00000416911 349 ntBASIC14.32□□□□□ -0.12
VPS13CQ709C8 AC107918.2-201ENST00000530817 355 ntBASIC14.32□□□□□ -0.12
VPS13CQ709C8 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.32□□□□□ -0.12
VPS13CQ709C8 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
VPS13CQ709C8 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
VPS13CQ709C8 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VPS13CQ709C8 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VPS13CQ709C8 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VPS13CQ709C8 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
VPS13CQ709C8 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC14.32□□□□□ -0.12
VPS13CQ709C8 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VPS13CQ709C8 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
VPS13CQ709C8 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.32□□□□□ -0.12
VPS13CQ709C8 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.32□□□□□ -0.12
VPS13CQ709C8 AC026120.1-201ENST00000611536 926 ntBASIC14.32□□□□□ -0.12
VPS13CQ709C8 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.32□□□□□ -0.12
VPS13CQ709C8 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VPS13CQ709C8 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
VPS13CQ709C8 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
VPS13CQ709C8 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS13CQ709C8 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS13CQ709C8 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.31□□□□□ -0.12
VPS13CQ709C8 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.31□□□□□ -0.12
VPS13CQ709C8 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.31□□□□□ -0.12
VPS13CQ709C8 SPTSSB-204ENST00000617024 1292 ntBASIC14.31□□□□□ -0.12
VPS13CQ709C8 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
VPS13CQ709C8 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS13CQ709C8 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
VPS13CQ709C8 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
VPS13CQ709C8 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS13CQ709C8 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VPS13CQ709C8 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS13CQ709C8 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
VPS13CQ709C8 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VPS13CQ709C8 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS13CQ709C8 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
VPS13CQ709C8 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VPS13CQ709C8 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.31□□□□□ -0.12
VPS13CQ709C8 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms