Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CTR9Q6PD62 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTR9Q6PD62 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTR9Q6PD62 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
CTR9Q6PD62 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
CTR9Q6PD62 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.61■□□□□ 0.89
CTR9Q6PD62 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTR9Q6PD62 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.61■□□□□ 0.89
CTR9Q6PD62 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CTR9Q6PD62 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTR9Q6PD62 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTR9Q6PD62 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CTR9Q6PD62 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTR9Q6PD62 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.61■□□□□ 0.89
CTR9Q6PD62 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.61■□□□□ 0.89
CTR9Q6PD62 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CTR9Q6PD62 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.61■□□□□ 0.89
CTR9Q6PD62 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CTR9Q6PD62 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.61■□□□□ 0.89
CTR9Q6PD62 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC20.61■□□□□ 0.89
CTR9Q6PD62 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC20.61■□□□□ 0.89
CTR9Q6PD62 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTR9Q6PD62 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTR9Q6PD62 PGM5P2-202ENST00000637225 1043 ntBASIC20.61■□□□□ 0.89
CTR9Q6PD62 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.61■□□□□ 0.89
CTR9Q6PD62 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTR9Q6PD62 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CTR9Q6PD62 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTR9Q6PD62 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.61■□□□□ 0.89
CTR9Q6PD62 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.61■□□□□ 0.89
CTR9Q6PD62 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTR9Q6PD62 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC20.6■□□□□ 0.89
CTR9Q6PD62 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTR9Q6PD62 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CTR9Q6PD62 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CTR9Q6PD62 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTR9Q6PD62 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTR9Q6PD62 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
CTR9Q6PD62 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTR9Q6PD62 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC20.6■□□□□ 0.89
CTR9Q6PD62 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTR9Q6PD62 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.6■□□□□ 0.89
CTR9Q6PD62 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.6■□□□□ 0.89
CTR9Q6PD62 PMS2P1-201ENST00000431037 1228 ntBASIC20.6■□□□□ 0.89
CTR9Q6PD62 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CTR9Q6PD62 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CTR9Q6PD62 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CTR9Q6PD62 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTR9Q6PD62 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.6■□□□□ 0.89
CTR9Q6PD62 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
CTR9Q6PD62 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTR9Q6PD62 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CTR9Q6PD62 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CTR9Q6PD62 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTR9Q6PD62 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC20.6■□□□□ 0.89
CTR9Q6PD62 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTR9Q6PD62 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.59■□□□□ 0.89
CTR9Q6PD62 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTR9Q6PD62 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CTR9Q6PD62 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTR9Q6PD62 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.59■□□□□ 0.89
CTR9Q6PD62 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTR9Q6PD62 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTR9Q6PD62 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTR9Q6PD62 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC20.59■□□□□ 0.89
CTR9Q6PD62 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.59■□□□□ 0.89
CTR9Q6PD62 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.59■□□□□ 0.89
CTR9Q6PD62 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTR9Q6PD62 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.59■□□□□ 0.89
CTR9Q6PD62 GPR89P-201ENST00000407924 1495 ntBASIC20.59■□□□□ 0.89
CTR9Q6PD62 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTR9Q6PD62 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.59■□□□□ 0.89
CTR9Q6PD62 PTCHD3P3-201ENST00000403073 906 ntBASIC20.59■□□□□ 0.89
CTR9Q6PD62 RPS15P9-201ENST00000494093 319 ntBASIC20.59■□□□□ 0.89
CTR9Q6PD62 KRT18P58-201ENST00000527480 1120 ntBASIC20.59■□□□□ 0.89
CTR9Q6PD62 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC20.59■□□□□ 0.89
CTR9Q6PD62 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.59■□□□□ 0.89
CTR9Q6PD62 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTR9Q6PD62 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTR9Q6PD62 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC20.59■□□□□ 0.89
CTR9Q6PD62 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTR9Q6PD62 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTR9Q6PD62 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTR9Q6PD62 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTR9Q6PD62 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTR9Q6PD62 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CTR9Q6PD62 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
CTR9Q6PD62 GNAS-203ENST00000306120 1878 ntBASIC20.58■□□□□ 0.89
CTR9Q6PD62 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CTR9Q6PD62 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTR9Q6PD62 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.58■□□□□ 0.89
CTR9Q6PD62 AL590787.1-201ENST00000568856 1315 ntBASIC20.58■□□□□ 0.89
CTR9Q6PD62 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CTR9Q6PD62 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTR9Q6PD62 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTR9Q6PD62 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CTR9Q6PD62 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTR9Q6PD62 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CTR9Q6PD62 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTR9Q6PD62 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms