Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.93■□□□□ 0.78
USH1GQ495M9 AC008667.4-201ENST00000607370 168 ntBASIC19.93■□□□□ 0.78
USH1GQ495M9 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.93■□□□□ 0.78
USH1GQ495M9 AC064836.3-201ENST00000607928 673 ntBASIC19.93■□□□□ 0.78
USH1GQ495M9 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USH1GQ495M9 AC004790.2-201ENST00000623588 572 ntBASIC19.93■□□□□ 0.78
USH1GQ495M9 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.93■□□□□ 0.78
USH1GQ495M9 AL805961.1-202ENST00000641562 540 ntBASIC19.93■□□□□ 0.78
USH1GQ495M9 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USH1GQ495M9 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
USH1GQ495M9 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
USH1GQ495M9 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USH1GQ495M9 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USH1GQ495M9 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
USH1GQ495M9 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USH1GQ495M9 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.93■□□□□ 0.78
USH1GQ495M9 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.93■□□□□ 0.78
USH1GQ495M9 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USH1GQ495M9 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.93■□□□□ 0.78
USH1GQ495M9 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
USH1GQ495M9 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
USH1GQ495M9 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USH1GQ495M9 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USH1GQ495M9 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.92■□□□□ 0.78
USH1GQ495M9 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.92■□□□□ 0.78
USH1GQ495M9 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USH1GQ495M9 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
USH1GQ495M9 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.92■□□□□ 0.78
USH1GQ495M9 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.92■□□□□ 0.78
USH1GQ495M9 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USH1GQ495M9 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
USH1GQ495M9 AC133963.1-201ENST00000504166 1679 ntBASIC19.92■□□□□ 0.78
USH1GQ495M9 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USH1GQ495M9 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
USH1GQ495M9 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.92■□□□□ 0.78
USH1GQ495M9 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.92■□□□□ 0.78
USH1GQ495M9 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USH1GQ495M9 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
USH1GQ495M9 ACTG1P4-201ENST00000425123 1122 ntBASIC19.92■□□□□ 0.78
USH1GQ495M9 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USH1GQ495M9 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
USH1GQ495M9 IGHV3-65-201ENST00000523210 341 ntBASIC19.92■□□□□ 0.78
USH1GQ495M9 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.92■□□□□ 0.78
USH1GQ495M9 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USH1GQ495M9 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
USH1GQ495M9 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
USH1GQ495M9 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.92■□□□□ 0.78
USH1GQ495M9 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
USH1GQ495M9 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
USH1GQ495M9 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
USH1GQ495M9 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USH1GQ495M9 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.91■□□□□ 0.78
USH1GQ495M9 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USH1GQ495M9 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USH1GQ495M9 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.91■□□□□ 0.78
USH1GQ495M9 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USH1GQ495M9 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.91■□□□□ 0.78
USH1GQ495M9 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USH1GQ495M9 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.91■□□□□ 0.78
USH1GQ495M9 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USH1GQ495M9 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.91■□□□□ 0.78
USH1GQ495M9 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USH1GQ495M9 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USH1GQ495M9 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.91■□□□□ 0.78
USH1GQ495M9 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.91■□□□□ 0.78
USH1GQ495M9 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
USH1GQ495M9 BX842568.4-201ENST00000421222 227 ntBASIC19.91■□□□□ 0.78
USH1GQ495M9 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
USH1GQ495M9 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.91■□□□□ 0.78
USH1GQ495M9 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.91■□□□□ 0.78
USH1GQ495M9 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.91■□□□□ 0.78
USH1GQ495M9 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.91■□□□□ 0.78
USH1GQ495M9 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.91■□□□□ 0.78
USH1GQ495M9 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.91■□□□□ 0.78
USH1GQ495M9 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.91■□□□□ 0.78
USH1GQ495M9 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.91■□□□□ 0.78
USH1GQ495M9 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USH1GQ495M9 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
USH1GQ495M9 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USH1GQ495M9 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
USH1GQ495M9 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USH1GQ495M9 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
USH1GQ495M9 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USH1GQ495M9 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
USH1GQ495M9 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.91■□□□□ 0.78
USH1GQ495M9 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USH1GQ495M9 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
USH1GQ495M9 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
USH1GQ495M9 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
USH1GQ495M9 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.9■□□□□ 0.78
USH1GQ495M9 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
USH1GQ495M9 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
USH1GQ495M9 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.9■□□□□ 0.78
USH1GQ495M9 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USH1GQ495M9 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.9■□□□□ 0.78
USH1GQ495M9 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.9■□□□□ 0.78
USH1GQ495M9 AL133373.2-201ENST00000623187 2828 ntBASIC19.9■□□□□ 0.78
USH1GQ495M9 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.9■□□□□ 0.78
USH1GQ495M9 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USH1GQ495M9 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms