Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.83■□□□□ 0.61
TRIM71Q2Q1W2 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TRIM71Q2Q1W2 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM71Q2Q1W2 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM71Q2Q1W2 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM71Q2Q1W2 AL671277.1-201ENST00000429656 993 ntBASIC18.83■□□□□ 0.6
TRIM71Q2Q1W2 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.83■□□□□ 0.6
TRIM71Q2Q1W2 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM71Q2Q1W2 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.83■□□□□ 0.6
TRIM71Q2Q1W2 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.83■□□□□ 0.6
TRIM71Q2Q1W2 AC015911.4-201ENST00000588022 1070 ntBASIC18.83■□□□□ 0.6
TRIM71Q2Q1W2 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.83■□□□□ 0.6
TRIM71Q2Q1W2 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.83■□□□□ 0.6
TRIM71Q2Q1W2 AL645728.2-201ENST00000641974 660 ntBASIC18.83■□□□□ 0.6
TRIM71Q2Q1W2 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.83■□□□□ 0.6
TRIM71Q2Q1W2 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TRIM71Q2Q1W2 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM71Q2Q1W2 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TRIM71Q2Q1W2 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.83■□□□□ 0.6
TRIM71Q2Q1W2 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.83■□□□□ 0.6
TRIM71Q2Q1W2 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM71Q2Q1W2 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
TRIM71Q2Q1W2 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
TRIM71Q2Q1W2 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM71Q2Q1W2 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM71Q2Q1W2 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM71Q2Q1W2 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM71Q2Q1W2 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TRIM71Q2Q1W2 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM71Q2Q1W2 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM71Q2Q1W2 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TRIM71Q2Q1W2 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM71Q2Q1W2 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.82■□□□□ 0.6
TRIM71Q2Q1W2 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.82■□□□□ 0.6
TRIM71Q2Q1W2 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.82■□□□□ 0.6
TRIM71Q2Q1W2 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.82■□□□□ 0.6
TRIM71Q2Q1W2 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM71Q2Q1W2 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM71Q2Q1W2 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
TRIM71Q2Q1W2 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM71Q2Q1W2 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.82■□□□□ 0.6
TRIM71Q2Q1W2 AL390955.2-201ENST00000603032 514 ntBASIC18.82■□□□□ 0.6
TRIM71Q2Q1W2 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM71Q2Q1W2 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.82■□□□□ 0.6
TRIM71Q2Q1W2 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM71Q2Q1W2 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM71Q2Q1W2 HCG11-201ENST00000411553 5696 ntBASIC18.82■□□□□ 0.6
TRIM71Q2Q1W2 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TRIM71Q2Q1W2 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM71Q2Q1W2 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM71Q2Q1W2 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM71Q2Q1W2 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM71Q2Q1W2 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.82■□□□□ 0.6
TRIM71Q2Q1W2 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.82■□□□□ 0.6
TRIM71Q2Q1W2 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM71Q2Q1W2 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.82■□□□□ 0.6
TRIM71Q2Q1W2 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM71Q2Q1W2 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM71Q2Q1W2 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM71Q2Q1W2 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM71Q2Q1W2 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM71Q2Q1W2 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM71Q2Q1W2 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM71Q2Q1W2 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM71Q2Q1W2 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TRIM71Q2Q1W2 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM71Q2Q1W2 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM71Q2Q1W2 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.81■□□□□ 0.6
TRIM71Q2Q1W2 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM71Q2Q1W2 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TRIM71Q2Q1W2 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM71Q2Q1W2 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TRIM71Q2Q1W2 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM71Q2Q1W2 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM71Q2Q1W2 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TRIM71Q2Q1W2 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM71Q2Q1W2 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TRIM71Q2Q1W2 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM71Q2Q1W2 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.81■□□□□ 0.6
TRIM71Q2Q1W2 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.81■□□□□ 0.6
TRIM71Q2Q1W2 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM71Q2Q1W2 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.81■□□□□ 0.6
TRIM71Q2Q1W2 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.81■□□□□ 0.6
TRIM71Q2Q1W2 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TRIM71Q2Q1W2 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TRIM71Q2Q1W2 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TRIM71Q2Q1W2 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM71Q2Q1W2 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TRIM71Q2Q1W2 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM71Q2Q1W2 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.8■□□□□ 0.6
TRIM71Q2Q1W2 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM71Q2Q1W2 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM71Q2Q1W2 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.8■□□□□ 0.6
TRIM71Q2Q1W2 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TRIM71Q2Q1W2 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM71Q2Q1W2 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TRIM71Q2Q1W2 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.8■□□□□ 0.6
TRIM71Q2Q1W2 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM71Q2Q1W2 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TRIM71Q2Q1W2 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms