Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP1S1P61966 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP1S1P61966 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.48■□□□□ 0.39
AP1S1P61966 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.48■□□□□ 0.39
AP1S1P61966 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.48■□□□□ 0.39
AP1S1P61966 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP1S1P61966 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.48■□□□□ 0.39
AP1S1P61966 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
AP1S1P61966 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.48■□□□□ 0.39
AP1S1P61966 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.48■□□□□ 0.39
AP1S1P61966 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.48■□□□□ 0.39
AP1S1P61966 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.48■□□□□ 0.39
AP1S1P61966 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.48■□□□□ 0.39
AP1S1P61966 MIR7706-201ENST00000613747 67 ntBASIC17.48■□□□□ 0.39
AP1S1P61966 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.48■□□□□ 0.39
AP1S1P61966 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP1S1P61966 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP1S1P61966 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.48■□□□□ 0.39
AP1S1P61966 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.48■□□□□ 0.39
AP1S1P61966 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
AP1S1P61966 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP1S1P61966 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
AP1S1P61966 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP1S1P61966 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
AP1S1P61966 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
AP1S1P61966 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.47■□□□□ 0.39
AP1S1P61966 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.47■□□□□ 0.39
AP1S1P61966 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP1S1P61966 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP1S1P61966 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.47■□□□□ 0.39
AP1S1P61966 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP1S1P61966 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP1S1P61966 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
AP1S1P61966 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP1S1P61966 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.47■□□□□ 0.39
AP1S1P61966 KRT18P27-201ENST00000427733 1299 ntBASIC17.47■□□□□ 0.39
AP1S1P61966 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.47■□□□□ 0.39
AP1S1P61966 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.47■□□□□ 0.39
AP1S1P61966 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.47■□□□□ 0.39
AP1S1P61966 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.47■□□□□ 0.39
AP1S1P61966 AC105339.3-201ENST00000560043 636 ntBASIC17.47■□□□□ 0.39
AP1S1P61966 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.47■□□□□ 0.39
AP1S1P61966 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.47■□□□□ 0.39
AP1S1P61966 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.47■□□□□ 0.39
AP1S1P61966 AC116353.5-201ENST00000638148 1699 ntBASIC17.47■□□□□ 0.39
AP1S1P61966 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
AP1S1P61966 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP1S1P61966 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
AP1S1P61966 CROCCP2-202ENST00000412962 2773 ntBASIC17.47■□□□□ 0.39
AP1S1P61966 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP1S1P61966 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP1S1P61966 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP1S1P61966 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
AP1S1P61966 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP1S1P61966 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP1S1P61966 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP1S1P61966 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP1S1P61966 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP1S1P61966 PCDHB18P-201ENST00000524813 2368 ntBASIC17.46■□□□□ 0.39
AP1S1P61966 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
AP1S1P61966 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
AP1S1P61966 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.46■□□□□ 0.39
AP1S1P61966 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
AP1S1P61966 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP1S1P61966 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP1S1P61966 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
AP1S1P61966 GPR89P-201ENST00000407924 1495 ntBASIC17.46■□□□□ 0.39
AP1S1P61966 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.46■□□□□ 0.39
AP1S1P61966 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
AP1S1P61966 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
AP1S1P61966 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
AP1S1P61966 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.46■□□□□ 0.39
AP1S1P61966 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP1S1P61966 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.46■□□□□ 0.39
AP1S1P61966 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP1S1P61966 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.46■□□□□ 0.39
AP1S1P61966 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.46■□□□□ 0.39
AP1S1P61966 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.46■□□□□ 0.39
AP1S1P61966 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
AP1S1P61966 MIR1199-201ENST00000621445 119 ntBASIC17.46■□□□□ 0.39
AP1S1P61966 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP1S1P61966 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP1S1P61966 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.46■□□□□ 0.39
AP1S1P61966 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP1S1P61966 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.46■□□□□ 0.39
AP1S1P61966 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP1S1P61966 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
AP1S1P61966 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
AP1S1P61966 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP1S1P61966 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
AP1S1P61966 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP1S1P61966 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
AP1S1P61966 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP1S1P61966 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
AP1S1P61966 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
AP1S1P61966 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.46■□□□□ 0.38
AP1S1P61966 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
AP1S1P61966 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.45■□□□□ 0.38
AP1S1P61966 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP1S1P61966 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms