Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CACNB3P54284 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC20.48■□□□□ 0.87
CACNB3P54284 ADH5P3-201ENST00000433842 1137 ntBASIC20.48■□□□□ 0.87
CACNB3P54284 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC20.48■□□□□ 0.87
CACNB3P54284 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CACNB3P54284 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CACNB3P54284 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CACNB3P54284 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
CACNB3P54284 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC20.48■□□□□ 0.87
CACNB3P54284 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CACNB3P54284 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.48■□□□□ 0.87
CACNB3P54284 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CACNB3P54284 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.47■□□□□ 0.87
CACNB3P54284 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CACNB3P54284 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.47■□□□□ 0.87
CACNB3P54284 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CACNB3P54284 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.47■□□□□ 0.87
CACNB3P54284 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CACNB3P54284 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CACNB3P54284 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CACNB3P54284 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CACNB3P54284 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CACNB3P54284 CBR1-202ENST00000399191 838 ntTSL 3 BASIC20.47■□□□□ 0.87
CACNB3P54284 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CACNB3P54284 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC20.47■□□□□ 0.87
CACNB3P54284 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC20.47■□□□□ 0.87
CACNB3P54284 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CACNB3P54284 RPL28-209ENST00000560055 670 ntTSL 3 BASIC20.47■□□□□ 0.87
CACNB3P54284 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC20.47■□□□□ 0.87
CACNB3P54284 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CACNB3P54284 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CACNB3P54284 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CACNB3P54284 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC20.47■□□□□ 0.87
CACNB3P54284 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CACNB3P54284 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CACNB3P54284 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CACNB3P54284 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC20.47■□□□□ 0.87
CACNB3P54284 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CACNB3P54284 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.47■□□□□ 0.87
CACNB3P54284 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC20.47■□□□□ 0.87
CACNB3P54284 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC20.47■□□□□ 0.87
CACNB3P54284 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CACNB3P54284 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.47■□□□□ 0.87
CACNB3P54284 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CACNB3P54284 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CACNB3P54284 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.46■□□□□ 0.87
CACNB3P54284 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CACNB3P54284 FAM8A3P-201ENST00000427218 844 ntBASIC20.46■□□□□ 0.87
CACNB3P54284 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CACNB3P54284 TIMM8BP1-201ENST00000452384 211 ntBASIC20.46■□□□□ 0.87
CACNB3P54284 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC20.46■□□□□ 0.87
CACNB3P54284 AC107918.2-201ENST00000530817 355 ntBASIC20.46■□□□□ 0.87
CACNB3P54284 DAD1-205ENST00000543337 501 ntTSL 3 BASIC20.46■□□□□ 0.87
CACNB3P54284 AC093520.2-201ENST00000561830 333 ntBASIC20.46■□□□□ 0.87
CACNB3P54284 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC20.46■□□□□ 0.87
CACNB3P54284 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CACNB3P54284 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CACNB3P54284 BICD1-207ENST00000551848 1962 ntBASIC20.46■□□□□ 0.87
CACNB3P54284 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CACNB3P54284 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CACNB3P54284 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CACNB3P54284 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CACNB3P54284 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CACNB3P54284 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CACNB3P54284 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CACNB3P54284 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CACNB3P54284 AL121761.2-201ENST00000598007 1648 ntBASIC20.45■□□□□ 0.87
CACNB3P54284 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CACNB3P54284 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC20.45■□□□□ 0.86
CACNB3P54284 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC20.45■□□□□ 0.86
CACNB3P54284 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CACNB3P54284 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CACNB3P54284 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.45■□□□□ 0.86
CACNB3P54284 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CACNB3P54284 CALY-203ENST00000368558 825 ntTSL 5 BASIC20.45■□□□□ 0.86
CACNB3P54284 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC20.45■□□□□ 0.86
CACNB3P54284 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC20.45■□□□□ 0.86
CACNB3P54284 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC20.45■□□□□ 0.86
CACNB3P54284 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC20.45■□□□□ 0.86
CACNB3P54284 AC099522.2-201ENST00000607001 744 ntBASIC20.45■□□□□ 0.86
CACNB3P54284 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
CACNB3P54284 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC20.45■□□□□ 0.86
CACNB3P54284 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CACNB3P54284 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CACNB3P54284 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CACNB3P54284 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CACNB3P54284 LYSMD4-203ENST00000378904 2122 ntBASIC20.45■□□□□ 0.86
CACNB3P54284 LINC00304-203ENST00000565008 1864 ntBASIC20.45■□□□□ 0.86
CACNB3P54284 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CACNB3P54284 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
CACNB3P54284 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CACNB3P54284 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CACNB3P54284 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CACNB3P54284 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CACNB3P54284 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CACNB3P54284 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CACNB3P54284 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CACNB3P54284 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CACNB3P54284 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
CACNB3P54284 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms