Protein–RNA interactions for Protein: P23634

ATP2B4, Plasma membrane calcium-transporting ATPase 4, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4P23634 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC20.93■□□□□ 0.94
ATP2B4P23634 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
ATP2B4P23634 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2B4P23634 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
ATP2B4P23634 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2B4P23634 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2B4P23634 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC20.93■□□□□ 0.94
ATP2B4P23634 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.93■□□□□ 0.94
ATP2B4P23634 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.93■□□□□ 0.94
ATP2B4P23634 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2B4P23634 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP2B4P23634 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATP2B4P23634 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATP2B4P23634 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATP2B4P23634 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
ATP2B4P23634 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATP2B4P23634 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
ATP2B4P23634 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ATP2B4P23634 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC20.92■□□□□ 0.94
ATP2B4P23634 KRT8P48-201ENST00000515599 1220 ntBASIC20.92■□□□□ 0.94
ATP2B4P23634 THTPA-204ENST00000554970 569 ntTSL 4 BASIC20.92■□□□□ 0.94
ATP2B4P23634 THTPA-206ENST00000556015 535 ntTSL 3 BASIC20.92■□□□□ 0.94
ATP2B4P23634 SPCS2P1-201ENST00000561636 679 ntBASIC20.92■□□□□ 0.94
ATP2B4P23634 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC20.92■□□□□ 0.94
ATP2B4P23634 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC20.92■□□□□ 0.94
ATP2B4P23634 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC20.92■□□□□ 0.94
ATP2B4P23634 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC20.92■□□□□ 0.94
ATP2B4P23634 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.92■□□□□ 0.94
ATP2B4P23634 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.92■□□□□ 0.94
ATP2B4P23634 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.92■□□□□ 0.94
ATP2B4P23634 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.92■□□□□ 0.94
ATP2B4P23634 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATP2B4P23634 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.91■□□□□ 0.94
ATP2B4P23634 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.91■□□□□ 0.94
ATP2B4P23634 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP2B4P23634 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP2B4P23634 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP2B4P23634 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ATP2B4P23634 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
ATP2B4P23634 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP2B4P23634 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP2B4P23634 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC20.91■□□□□ 0.94
ATP2B4P23634 SPDYE11-202ENST00000450699 704 ntBASIC20.91■□□□□ 0.94
ATP2B4P23634 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP2B4P23634 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP2B4P23634 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ATP2B4P23634 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC20.91■□□□□ 0.94
ATP2B4P23634 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC20.91■□□□□ 0.94
ATP2B4P23634 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC20.91■□□□□ 0.94
ATP2B4P23634 SPDYE9P-201ENST00000570642 692 ntBASIC20.91■□□□□ 0.94
ATP2B4P23634 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC20.91■□□□□ 0.94
ATP2B4P23634 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ATP2B4P23634 SPDYE10P-202ENST00000612005 668 ntBASIC20.91■□□□□ 0.94
ATP2B4P23634 SPDYE8P-202ENST00000612377 668 ntBASIC20.91■□□□□ 0.94
ATP2B4P23634 AC009093.7-201ENST00000623853 1223 ntBASIC20.91■□□□□ 0.94
ATP2B4P23634 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC20.91■□□□□ 0.94
ATP2B4P23634 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP2B4P23634 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.9■□□□□ 0.94
ATP2B4P23634 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.9■□□□□ 0.94
ATP2B4P23634 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2B4P23634 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
ATP2B4P23634 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.9■□□□□ 0.94
ATP2B4P23634 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
ATP2B4P23634 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.9■□□□□ 0.94
ATP2B4P23634 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2B4P23634 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2B4P23634 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2B4P23634 AC087289.5-201ENST00000586076 3175 ntBASIC20.9■□□□□ 0.94
ATP2B4P23634 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC20.9■□□□□ 0.94
ATP2B4P23634 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
ATP2B4P23634 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
ATP2B4P23634 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2B4P23634 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2B4P23634 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2B4P23634 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2B4P23634 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC20.9■□□□□ 0.94
ATP2B4P23634 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC20.9■□□□□ 0.94
ATP2B4P23634 WDR53-203ENST00000429115 683 ntTSL 2 BASIC20.9■□□□□ 0.94
ATP2B4P23634 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC20.9■□□□□ 0.94
ATP2B4P23634 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC20.9■□□□□ 0.94
ATP2B4P23634 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC20.9■□□□□ 0.94
ATP2B4P23634 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2B4P23634 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2B4P23634 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2B4P23634 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2B4P23634 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2B4P23634 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2B4P23634 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
ATP2B4P23634 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2B4P23634 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2B4P23634 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2B4P23634 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP2B4P23634 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
ATP2B4P23634 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
ATP2B4P23634 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
ATP2B4P23634 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
ATP2B4P23634 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
ATP2B4P23634 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ATP2B4P23634 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.89■□□□□ 0.94
ATP2B4P23634 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC20.89■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms