Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBB4AP04350 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBB4AP04350 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBB4AP04350 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
TUBB4AP04350 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TUBB4AP04350 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TUBB4AP04350 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TUBB4AP04350 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBB4AP04350 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TUBB4AP04350 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBB4AP04350 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC18.65■□□□□ 0.58
TUBB4AP04350 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TUBB4AP04350 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBB4AP04350 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBB4AP04350 AC026366.1-201ENST00000488803 879 ntBASIC18.65■□□□□ 0.58
TUBB4AP04350 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.65■□□□□ 0.58
TUBB4AP04350 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TUBB4AP04350 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.65■□□□□ 0.58
TUBB4AP04350 AF186192.3-201ENST00000583427 947 ntBASIC18.65■□□□□ 0.58
TUBB4AP04350 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.65■□□□□ 0.58
TUBB4AP04350 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TUBB4AP04350 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.65■□□□□ 0.58
TUBB4AP04350 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBB4AP04350 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TUBB4AP04350 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.65■□□□□ 0.58
TUBB4AP04350 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.65■□□□□ 0.58
TUBB4AP04350 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBB4AP04350 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBB4AP04350 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TUBB4AP04350 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBB4AP04350 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBB4AP04350 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBB4AP04350 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBB4AP04350 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.65■□□□□ 0.58
TUBB4AP04350 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TUBB4AP04350 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBB4AP04350 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBB4AP04350 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBB4AP04350 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TUBB4AP04350 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBB4AP04350 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBB4AP04350 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
TUBB4AP04350 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.64■□□□□ 0.58
TUBB4AP04350 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
TUBB4AP04350 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
TUBB4AP04350 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
TUBB4AP04350 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
TUBB4AP04350 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
TUBB4AP04350 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TUBB4AP04350 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TUBB4AP04350 AC099063.4-201ENST00000641099 1602 ntBASIC18.64■□□□□ 0.57
TUBB4AP04350 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.64■□□□□ 0.57
TUBB4AP04350 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
TUBB4AP04350 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC18.64■□□□□ 0.57
TUBB4AP04350 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TUBB4AP04350 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TUBB4AP04350 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.64■□□□□ 0.57
TUBB4AP04350 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TUBB4AP04350 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.64■□□□□ 0.57
TUBB4AP04350 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.64■□□□□ 0.57
TUBB4AP04350 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TUBB4AP04350 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TUBB4AP04350 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.64■□□□□ 0.57
TUBB4AP04350 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.64■□□□□ 0.57
TUBB4AP04350 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.64■□□□□ 0.57
TUBB4AP04350 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.64■□□□□ 0.57
TUBB4AP04350 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.64■□□□□ 0.57
TUBB4AP04350 AL662844.4-201ENST00000606367 2838 ntBASIC18.64■□□□□ 0.57
TUBB4AP04350 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TUBB4AP04350 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TUBB4AP04350 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TUBB4AP04350 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TUBB4AP04350 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TUBB4AP04350 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TUBB4AP04350 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TUBB4AP04350 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TUBB4AP04350 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TUBB4AP04350 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TUBB4AP04350 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TUBB4AP04350 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.64■□□□□ 0.57
TUBB4AP04350 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC18.64■□□□□ 0.57
TUBB4AP04350 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TUBB4AP04350 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TUBB4AP04350 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TUBB4AP04350 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TUBB4AP04350 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
TUBB4AP04350 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TUBB4AP04350 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TUBB4AP04350 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TUBB4AP04350 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TUBB4AP04350 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.63■□□□□ 0.57
TUBB4AP04350 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TUBB4AP04350 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.63■□□□□ 0.57
TUBB4AP04350 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TUBB4AP04350 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TUBB4AP04350 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TUBB4AP04350 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TUBB4AP04350 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.63■□□□□ 0.57
TUBB4AP04350 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TUBB4AP04350 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms