Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.61■□□□□ 0.57
TIMP1P01033 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.61■□□□□ 0.57
TIMP1P01033 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TIMP1P01033 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
TIMP1P01033 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TIMP1P01033 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.61■□□□□ 0.57
TIMP1P01033 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TIMP1P01033 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TIMP1P01033 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TIMP1P01033 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TIMP1P01033 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TIMP1P01033 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.6■□□□□ 0.57
TIMP1P01033 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.6■□□□□ 0.57
TIMP1P01033 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TIMP1P01033 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TIMP1P01033 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TIMP1P01033 KRT18P55-202ENST00000578578 1546 ntBASIC18.6■□□□□ 0.57
TIMP1P01033 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TIMP1P01033 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
TIMP1P01033 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
TIMP1P01033 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TIMP1P01033 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.6■□□□□ 0.57
TIMP1P01033 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
TIMP1P01033 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
TIMP1P01033 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
TIMP1P01033 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TIMP1P01033 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.6■□□□□ 0.57
TIMP1P01033 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.6■□□□□ 0.57
TIMP1P01033 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TIMP1P01033 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.6■□□□□ 0.57
TIMP1P01033 AC027369.6-201ENST00000525520 931 ntBASIC18.6■□□□□ 0.57
TIMP1P01033 AC027307.2-201ENST00000591252 911 ntBASIC18.6■□□□□ 0.57
TIMP1P01033 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TIMP1P01033 AL139327.4-201ENST00000612362 153 ntBASIC18.6■□□□□ 0.57
TIMP1P01033 AL590560.3-201ENST00000623350 461 ntBASIC18.6■□□□□ 0.57
TIMP1P01033 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.6■□□□□ 0.57
TIMP1P01033 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TIMP1P01033 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TIMP1P01033 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TIMP1P01033 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TIMP1P01033 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
TIMP1P01033 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TIMP1P01033 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TIMP1P01033 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.6■□□□□ 0.57
TIMP1P01033 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TIMP1P01033 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TIMP1P01033 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TIMP1P01033 AC100757.3-201ENST00000622361 1406 ntBASIC18.59■□□□□ 0.57
TIMP1P01033 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TIMP1P01033 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TIMP1P01033 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TIMP1P01033 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TIMP1P01033 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
TIMP1P01033 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TIMP1P01033 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TIMP1P01033 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TIMP1P01033 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.59■□□□□ 0.57
TIMP1P01033 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.59■□□□□ 0.57
TIMP1P01033 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.59■□□□□ 0.57
TIMP1P01033 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC18.59■□□□□ 0.57
TIMP1P01033 AC004233.3-201ENST00000607794 1269 ntBASIC18.59■□□□□ 0.57
TIMP1P01033 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TIMP1P01033 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TIMP1P01033 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.59■□□□□ 0.57
TIMP1P01033 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
TIMP1P01033 REXO1L9P-201ENST00000604264 2108 ntBASIC18.59■□□□□ 0.57
TIMP1P01033 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TIMP1P01033 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TIMP1P01033 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TIMP1P01033 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TIMP1P01033 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TIMP1P01033 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TIMP1P01033 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC18.59■□□□□ 0.57
TIMP1P01033 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
TIMP1P01033 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TIMP1P01033 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
TIMP1P01033 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.58■□□□□ 0.57
TIMP1P01033 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.58■□□□□ 0.57
TIMP1P01033 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.58■□□□□ 0.57
TIMP1P01033 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TIMP1P01033 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
TIMP1P01033 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TIMP1P01033 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TIMP1P01033 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TIMP1P01033 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.58■□□□□ 0.56
TIMP1P01033 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TIMP1P01033 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.58■□□□□ 0.56
TIMP1P01033 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
TIMP1P01033 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.58■□□□□ 0.56
TIMP1P01033 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TIMP1P01033 TSSK5P-201ENST00000423978 907 ntBASIC18.58■□□□□ 0.56
TIMP1P01033 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
TIMP1P01033 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
TIMP1P01033 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.58■□□□□ 0.56
TIMP1P01033 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.58■□□□□ 0.56
TIMP1P01033 AC073592.8-201ENST00000624126 511 ntBASIC18.58■□□□□ 0.56
TIMP1P01033 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.58■□□□□ 0.56
TIMP1P01033 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TIMP1P01033 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TIMP1P01033 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms