Protein–RNA interactions for Protein: O95447

LCA5L, Lebercilin-like protein, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5LO95447 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCA5LO95447 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCA5LO95447 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
LCA5LO95447 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCA5LO95447 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCA5LO95447 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LCA5LO95447 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.46■□□□□ 0.55
LCA5LO95447 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
LCA5LO95447 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.45■□□□□ 0.54
LCA5LO95447 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LCA5LO95447 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.45■□□□□ 0.54
LCA5LO95447 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
LCA5LO95447 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LCA5LO95447 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
LCA5LO95447 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
LCA5LO95447 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
LCA5LO95447 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LCA5LO95447 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LCA5LO95447 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.45■□□□□ 0.54
LCA5LO95447 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.45■□□□□ 0.54
LCA5LO95447 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.45■□□□□ 0.54
LCA5LO95447 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.45■□□□□ 0.54
LCA5LO95447 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LCA5LO95447 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.45■□□□□ 0.54
LCA5LO95447 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LCA5LO95447 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
LCA5LO95447 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.45■□□□□ 0.54
LCA5LO95447 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
LCA5LO95447 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.45■□□□□ 0.54
LCA5LO95447 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LCA5LO95447 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
LCA5LO95447 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LCA5LO95447 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LCA5LO95447 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.45■□□□□ 0.54
LCA5LO95447 CYP2T1P-202ENST00000641596 2535 ntBASIC18.45■□□□□ 0.54
LCA5LO95447 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.45■□□□□ 0.54
LCA5LO95447 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LCA5LO95447 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LCA5LO95447 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
LCA5LO95447 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
LCA5LO95447 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LCA5LO95447 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LCA5LO95447 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.44■□□□□ 0.54
LCA5LO95447 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LCA5LO95447 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LCA5LO95447 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.44■□□□□ 0.54
LCA5LO95447 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LCA5LO95447 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.44■□□□□ 0.54
LCA5LO95447 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.44■□□□□ 0.54
LCA5LO95447 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.44■□□□□ 0.54
LCA5LO95447 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LCA5LO95447 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LCA5LO95447 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.44■□□□□ 0.54
LCA5LO95447 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
LCA5LO95447 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LCA5LO95447 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LCA5LO95447 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LCA5LO95447 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
LCA5LO95447 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LCA5LO95447 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LCA5LO95447 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
LCA5LO95447 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LCA5LO95447 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
LCA5LO95447 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LCA5LO95447 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
LCA5LO95447 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.43■□□□□ 0.54
LCA5LO95447 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LCA5LO95447 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LCA5LO95447 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.43■□□□□ 0.54
LCA5LO95447 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.43■□□□□ 0.54
LCA5LO95447 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LCA5LO95447 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
LCA5LO95447 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.43■□□□□ 0.54
LCA5LO95447 AC005521.1-201ENST00000393351 872 ntBASIC18.43■□□□□ 0.54
LCA5LO95447 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
LCA5LO95447 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.43■□□□□ 0.54
LCA5LO95447 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.43■□□□□ 0.54
LCA5LO95447 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.43■□□□□ 0.54
LCA5LO95447 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.43■□□□□ 0.54
LCA5LO95447 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LCA5LO95447 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.43■□□□□ 0.54
LCA5LO95447 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.43■□□□□ 0.54
LCA5LO95447 AL592071.1-201ENST00000611956 408 ntBASIC18.43■□□□□ 0.54
LCA5LO95447 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
LCA5LO95447 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LCA5LO95447 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LCA5LO95447 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.43■□□□□ 0.54
LCA5LO95447 GPR89P-201ENST00000407924 1495 ntBASIC18.43■□□□□ 0.54
LCA5LO95447 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.43■□□□□ 0.54
LCA5LO95447 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.43■□□□□ 0.54
LCA5LO95447 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LCA5LO95447 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LCA5LO95447 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LCA5LO95447 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LCA5LO95447 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LCA5LO95447 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LCA5LO95447 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LCA5LO95447 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LCA5LO95447 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LCA5LO95447 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms