Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SOX30O94993 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SOX30O94993 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SOX30O94993 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SOX30O94993 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SOX30O94993 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SOX30O94993 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
SOX30O94993 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.22■□□□□ 0.19
SOX30O94993 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.22■□□□□ 0.19
SOX30O94993 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.22■□□□□ 0.19
SOX30O94993 TNRC18P3-201ENST00000441896 2691 ntBASIC16.22■□□□□ 0.19
SOX30O94993 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SOX30O94993 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
SOX30O94993 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.22■□□□□ 0.19
SOX30O94993 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SOX30O94993 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SOX30O94993 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
SOX30O94993 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SOX30O94993 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SOX30O94993 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SOX30O94993 AC046185.3-201ENST00000623228 1824 ntBASIC16.22■□□□□ 0.19
SOX30O94993 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SOX30O94993 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SOX30O94993 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.21■□□□□ 0.19
SOX30O94993 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.21■□□□□ 0.19
SOX30O94993 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SOX30O94993 AC116353.5-201ENST00000638148 1699 ntBASIC16.21■□□□□ 0.19
SOX30O94993 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SOX30O94993 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
SOX30O94993 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.21■□□□□ 0.19
SOX30O94993 KRT8P10-201ENST00000450021 1447 ntBASIC16.21■□□□□ 0.19
SOX30O94993 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SOX30O94993 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SOX30O94993 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SOX30O94993 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.21■□□□□ 0.19
SOX30O94993 NSUN5P1-202ENST00000421140 1535 ntBASIC16.21■□□□□ 0.19
SOX30O94993 NSUN5P2-203ENST00000457352 1529 ntBASIC16.21■□□□□ 0.19
SOX30O94993 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.21■□□□□ 0.19
SOX30O94993 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.21■□□□□ 0.19
SOX30O94993 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
SOX30O94993 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SOX30O94993 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
SOX30O94993 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SOX30O94993 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.21■□□□□ 0.19
SOX30O94993 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.21■□□□□ 0.19
SOX30O94993 DUSP5P1-201ENST00000441325 1139 ntBASIC16.21■□□□□ 0.19
SOX30O94993 STK19B-204ENST00000512515 211 ntBASIC16.21■□□□□ 0.19
SOX30O94993 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.21■□□□□ 0.19
SOX30O94993 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.21■□□□□ 0.19
SOX30O94993 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SOX30O94993 NPAP1P7-201ENST00000613027 823 ntBASIC16.21■□□□□ 0.19
SOX30O94993 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.21■□□□□ 0.19
SOX30O94993 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SOX30O94993 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SOX30O94993 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SOX30O94993 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SOX30O94993 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.21■□□□□ 0.19
SOX30O94993 AC084018.2-201ENST00000613093 2607 ntBASIC16.21■□□□□ 0.19
SOX30O94993 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.21■□□□□ 0.19
SOX30O94993 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SOX30O94993 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
SOX30O94993 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
SOX30O94993 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SOX30O94993 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SOX30O94993 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SOX30O94993 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.2■□□□□ 0.18
SOX30O94993 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SOX30O94993 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.2■□□□□ 0.18
SOX30O94993 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SOX30O94993 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.2■□□□□ 0.18
SOX30O94993 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SOX30O94993 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SOX30O94993 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SOX30O94993 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SOX30O94993 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.2■□□□□ 0.18
SOX30O94993 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SOX30O94993 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SOX30O94993 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
SOX30O94993 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.2■□□□□ 0.18
SOX30O94993 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SOX30O94993 TPM4P1-201ENST00000436100 807 ntBASIC16.2■□□□□ 0.18
SOX30O94993 LINC00265-3P-201ENST00000447588 903 ntBASIC16.2■□□□□ 0.18
SOX30O94993 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.2■□□□□ 0.18
SOX30O94993 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.2■□□□□ 0.18
SOX30O94993 MIR3180-1-201ENST00000580374 94 ntBASIC16.2■□□□□ 0.18
SOX30O94993 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.2■□□□□ 0.18
SOX30O94993 MIR3180-3-201ENST00000584616 94 ntBASIC16.2■□□□□ 0.18
SOX30O94993 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SOX30O94993 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.2■□□□□ 0.18
SOX30O94993 AC114341.1-201ENST00000618070 349 ntBASIC16.2■□□□□ 0.18
SOX30O94993 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
SOX30O94993 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SOX30O94993 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.2■□□□□ 0.18
SOX30O94993 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.2■□□□□ 0.18
SOX30O94993 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.2■□□□□ 0.18
SOX30O94993 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.2■□□□□ 0.18
SOX30O94993 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
SOX30O94993 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SOX30O94993 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SOX30O94993 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms