Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 MIR6080-201ENST00000617359 66 ntBASIC22.77■■□□□ 1.24
LTN1O94822 AL390754.1-201ENST00000619088 582 ntBASIC22.77■■□□□ 1.24
LTN1O94822 AL353732.1-201ENST00000569618 1459 ntBASIC22.77■■□□□ 1.24
LTN1O94822 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
LTN1O94822 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
LTN1O94822 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
LTN1O94822 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
LTN1O94822 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC22.77■■□□□ 1.24
LTN1O94822 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC22.77■■□□□ 1.24
LTN1O94822 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC22.77■■□□□ 1.23
LTN1O94822 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
LTN1O94822 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
LTN1O94822 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
LTN1O94822 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
LTN1O94822 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
LTN1O94822 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
LTN1O94822 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC22.76■■□□□ 1.23
LTN1O94822 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC22.76■■□□□ 1.23
LTN1O94822 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC22.76■■□□□ 1.23
LTN1O94822 AC005237.2-201ENST00000434368 219 ntBASIC22.76■■□□□ 1.23
LTN1O94822 AC125807.1-201ENST00000483097 614 ntBASIC22.76■■□□□ 1.23
LTN1O94822 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
LTN1O94822 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
LTN1O94822 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC22.76■■□□□ 1.23
LTN1O94822 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC22.76■■□□□ 1.23
LTN1O94822 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
LTN1O94822 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC22.76■■□□□ 1.23
LTN1O94822 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC22.76■■□□□ 1.23
LTN1O94822 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
LTN1O94822 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC22.76■■□□□ 1.23
LTN1O94822 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC22.76■■□□□ 1.23
LTN1O94822 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC22.76■■□□□ 1.23
LTN1O94822 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
LTN1O94822 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
LTN1O94822 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
LTN1O94822 HCG4-201ENST00000418983 998 ntBASIC22.76■■□□□ 1.23
LTN1O94822 TREML5P-201ENST00000421694 576 ntBASIC22.76■■□□□ 1.23
LTN1O94822 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC22.76■■□□□ 1.23
LTN1O94822 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC22.76■■□□□ 1.23
LTN1O94822 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC22.76■■□□□ 1.23
LTN1O94822 YTHDF3-AS1-201ENST00000603538 718 ntBASIC22.76■■□□□ 1.23
LTN1O94822 AC084121.4-201ENST00000641598 221 ntBASIC22.76■■□□□ 1.23
LTN1O94822 AF228730.8-201ENST00000642140 221 ntBASIC22.76■■□□□ 1.23
LTN1O94822 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
LTN1O94822 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
LTN1O94822 AC012569.1-201ENST00000591191 1524 ntBASIC22.76■■□□□ 1.23
LTN1O94822 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC22.76■■□□□ 1.23
LTN1O94822 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC22.75■■□□□ 1.23
LTN1O94822 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
LTN1O94822 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
LTN1O94822 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
LTN1O94822 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC22.75■■□□□ 1.23
LTN1O94822 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
LTN1O94822 AC133963.1-201ENST00000504166 1679 ntBASIC22.75■■□□□ 1.23
LTN1O94822 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
LTN1O94822 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC22.75■■□□□ 1.23
LTN1O94822 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC22.75■■□□□ 1.23
LTN1O94822 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
LTN1O94822 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC22.75■■□□□ 1.23
LTN1O94822 AC236430.1-201ENST00000402231 743 ntBASIC22.75■■□□□ 1.23
LTN1O94822 CENPM-205ENST00000404067 905 ntTSL 3 BASIC22.75■■□□□ 1.23
LTN1O94822 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC22.75■■□□□ 1.23
LTN1O94822 AC107890.1-201ENST00000422478 521 ntBASIC22.75■■□□□ 1.23
LTN1O94822 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC22.75■■□□□ 1.23
LTN1O94822 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
LTN1O94822 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
LTN1O94822 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
LTN1O94822 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
LTN1O94822 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
LTN1O94822 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC22.74■■□□□ 1.23
LTN1O94822 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
LTN1O94822 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC22.74■■□□□ 1.23
LTN1O94822 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC22.74■■□□□ 1.23
LTN1O94822 SPCS2P4-201ENST00000436160 681 ntBASIC22.74■■□□□ 1.23
LTN1O94822 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC22.74■■□□□ 1.23
LTN1O94822 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC22.74■■□□□ 1.23
LTN1O94822 AC087641.1-201ENST00000557561 1021 ntBASIC22.74■■□□□ 1.23
LTN1O94822 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC22.74■■□□□ 1.23
LTN1O94822 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
LTN1O94822 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC22.74■■□□□ 1.23
LTN1O94822 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
LTN1O94822 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
LTN1O94822 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
LTN1O94822 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
LTN1O94822 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
LTN1O94822 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
LTN1O94822 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
LTN1O94822 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
LTN1O94822 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC22.73■■□□□ 1.23
LTN1O94822 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC22.73■■□□□ 1.23
LTN1O94822 AL671277.1-201ENST00000429656 993 ntBASIC22.73■■□□□ 1.23
LTN1O94822 RBPMS2P1-201ENST00000437762 623 ntBASIC22.73■■□□□ 1.23
LTN1O94822 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC22.73■■□□□ 1.23
LTN1O94822 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
LTN1O94822 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC22.73■■□□□ 1.23
LTN1O94822 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
LTN1O94822 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC22.73■■□□□ 1.23
LTN1O94822 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
LTN1O94822 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC22.73■■□□□ 1.23
LTN1O94822 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms