Protein–RNA interactions for Protein: O60869

EDF1, Endothelial differentiation-related factor 1, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1O60869 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
EDF1O60869 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EDF1O60869 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
EDF1O60869 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EDF1O60869 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EDF1O60869 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
EDF1O60869 CROCCP1-201ENST00000426910 5675 ntBASIC17.12■□□□□ 0.33
EDF1O60869 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
EDF1O60869 KRT89P-201ENST00000620027 1478 ntBASIC17.12■□□□□ 0.33
EDF1O60869 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
EDF1O60869 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
EDF1O60869 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EDF1O60869 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
EDF1O60869 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
EDF1O60869 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.12■□□□□ 0.33
EDF1O60869 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
EDF1O60869 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
EDF1O60869 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.12■□□□□ 0.33
EDF1O60869 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.12■□□□□ 0.33
EDF1O60869 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EDF1O60869 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
EDF1O60869 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
EDF1O60869 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.12■□□□□ 0.33
EDF1O60869 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
EDF1O60869 HLA-L-209ENST00000420110 1011 ntBASIC17.12■□□□□ 0.33
EDF1O60869 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.12■□□□□ 0.33
EDF1O60869 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.12■□□□□ 0.33
EDF1O60869 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.12■□□□□ 0.33
EDF1O60869 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.12■□□□□ 0.33
EDF1O60869 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.12■□□□□ 0.33
EDF1O60869 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.12■□□□□ 0.33
EDF1O60869 AC009154.2-201ENST00000621177 724 ntBASIC17.12■□□□□ 0.33
EDF1O60869 AL359736.2-201ENST00000621992 437 ntBASIC17.12■□□□□ 0.33
EDF1O60869 AC116562.4-202ENST00000641738 218 ntBASIC17.12■□□□□ 0.33
EDF1O60869 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EDF1O60869 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.12■□□□□ 0.33
EDF1O60869 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.12■□□□□ 0.33
EDF1O60869 AL365203.3-201ENST00000609742 2057 ntBASIC17.12■□□□□ 0.33
EDF1O60869 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EDF1O60869 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EDF1O60869 HYMAI-201ENST00000635591 3347 ntBASIC17.12■□□□□ 0.33
EDF1O60869 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EDF1O60869 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.12■□□□□ 0.33
EDF1O60869 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EDF1O60869 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.12■□□□□ 0.33
EDF1O60869 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
EDF1O60869 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EDF1O60869 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.12■□□□□ 0.33
EDF1O60869 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.12■□□□□ 0.33
EDF1O60869 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EDF1O60869 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EDF1O60869 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EDF1O60869 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.11■□□□□ 0.33
EDF1O60869 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
EDF1O60869 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
EDF1O60869 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.11■□□□□ 0.33
EDF1O60869 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
EDF1O60869 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EDF1O60869 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EDF1O60869 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.11■□□□□ 0.33
EDF1O60869 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EDF1O60869 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
EDF1O60869 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EDF1O60869 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EDF1O60869 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.11■□□□□ 0.33
EDF1O60869 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.11■□□□□ 0.33
EDF1O60869 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.11■□□□□ 0.33
EDF1O60869 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.11■□□□□ 0.33
EDF1O60869 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.11■□□□□ 0.33
EDF1O60869 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.11■□□□□ 0.33
EDF1O60869 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
EDF1O60869 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.11■□□□□ 0.33
EDF1O60869 FAM197Y4-202ENST00000622692 608 ntBASIC17.11■□□□□ 0.33
EDF1O60869 AL157888.1-201ENST00000631930 593 ntBASIC17.11■□□□□ 0.33
EDF1O60869 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
EDF1O60869 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.11■□□□□ 0.33
EDF1O60869 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
EDF1O60869 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.11■□□□□ 0.33
EDF1O60869 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.11■□□□□ 0.33
EDF1O60869 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EDF1O60869 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.11■□□□□ 0.33
EDF1O60869 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
EDF1O60869 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.11■□□□□ 0.33
EDF1O60869 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.11■□□□□ 0.33
EDF1O60869 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.11■□□□□ 0.33
EDF1O60869 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
EDF1O60869 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
EDF1O60869 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EDF1O60869 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.11■□□□□ 0.33
EDF1O60869 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.11■□□□□ 0.33
EDF1O60869 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
EDF1O60869 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
EDF1O60869 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EDF1O60869 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
EDF1O60869 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
EDF1O60869 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
EDF1O60869 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.1■□□□□ 0.33
EDF1O60869 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
EDF1O60869 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
EDF1O60869 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms