Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXN1O15353 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
FOXN1O15353 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXN1O15353 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.72■□□□□ 0.91
FOXN1O15353 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXN1O15353 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.72■□□□□ 0.91
FOXN1O15353 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FOXN1O15353 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXN1O15353 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FOXN1O15353 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.72■□□□□ 0.91
FOXN1O15353 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
FOXN1O15353 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXN1O15353 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
FOXN1O15353 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.71■□□□□ 0.91
FOXN1O15353 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
FOXN1O15353 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXN1O15353 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXN1O15353 CENPM-205ENST00000404067 905 ntTSL 3 BASIC20.71■□□□□ 0.91
FOXN1O15353 AC074386.1-202ENST00000463561 864 ntBASIC20.71■□□□□ 0.91
FOXN1O15353 CD63-210ENST00000550776 870 ntTSL 5 BASIC20.71■□□□□ 0.91
FOXN1O15353 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
FOXN1O15353 SNX12-206ENST00000622259 661 ntTSL 5 BASIC20.71■□□□□ 0.91
FOXN1O15353 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.71■□□□□ 0.91
FOXN1O15353 AC010507.1-201ENST00000633895 436 ntBASIC20.71■□□□□ 0.91
FOXN1O15353 HFE2-206ENST00000634927 506 ntTSL 4 BASIC20.71■□□□□ 0.91
FOXN1O15353 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.71■□□□□ 0.91
FOXN1O15353 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXN1O15353 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
FOXN1O15353 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.71■□□□□ 0.91
FOXN1O15353 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
FOXN1O15353 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXN1O15353 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
FOXN1O15353 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.7■□□□□ 0.91
FOXN1O15353 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXN1O15353 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXN1O15353 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
FOXN1O15353 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
FOXN1O15353 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
FOXN1O15353 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXN1O15353 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXN1O15353 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
FOXN1O15353 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXN1O15353 GOLGA6L11P-201ENST00000417252 1298 ntBASIC20.7■□□□□ 0.9
FOXN1O15353 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC20.7■□□□□ 0.9
FOXN1O15353 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
FOXN1O15353 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC20.7■□□□□ 0.9
FOXN1O15353 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
FOXN1O15353 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.7■□□□□ 0.9
FOXN1O15353 AL596325.1-201ENST00000563991 1082 ntBASIC20.7■□□□□ 0.9
FOXN1O15353 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC20.7■□□□□ 0.9
FOXN1O15353 AC025048.6-201ENST00000634326 1161 ntBASIC20.7■□□□□ 0.9
FOXN1O15353 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.7■□□□□ 0.9
FOXN1O15353 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXN1O15353 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXN1O15353 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
FOXN1O15353 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.7■□□□□ 0.9
FOXN1O15353 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
FOXN1O15353 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC20.7■□□□□ 0.9
FOXN1O15353 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
FOXN1O15353 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.7■□□□□ 0.9
FOXN1O15353 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXN1O15353 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
FOXN1O15353 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.69■□□□□ 0.9
FOXN1O15353 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
FOXN1O15353 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXN1O15353 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.69■□□□□ 0.9
FOXN1O15353 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC20.69■□□□□ 0.9
FOXN1O15353 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXN1O15353 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXN1O15353 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.69■□□□□ 0.9
FOXN1O15353 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.69■□□□□ 0.9
FOXN1O15353 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXN1O15353 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXN1O15353 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.69■□□□□ 0.9
FOXN1O15353 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FOXN1O15353 AC006504.4-201ENST00000592118 1568 ntBASIC20.69■□□□□ 0.9
FOXN1O15353 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXN1O15353 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FOXN1O15353 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FOXN1O15353 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.69■□□□□ 0.9
FOXN1O15353 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXN1O15353 NABP1-203ENST00000409510 843 ntTSL 5 BASIC20.69■□□□□ 0.9
FOXN1O15353 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC20.69■□□□□ 0.9
FOXN1O15353 VPS29-207ENST00000549970 818 ntTSL 3 BASIC20.69■□□□□ 0.9
FOXN1O15353 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC20.69■□□□□ 0.9
FOXN1O15353 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FOXN1O15353 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC20.69■□□□□ 0.9
FOXN1O15353 AC027307.3-201ENST00000594262 1100 ntBASIC20.69■□□□□ 0.9
FOXN1O15353 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
FOXN1O15353 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
FOXN1O15353 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.69■□□□□ 0.9
FOXN1O15353 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC20.69■□□□□ 0.9
FOXN1O15353 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXN1O15353 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXN1O15353 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FOXN1O15353 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.68■□□□□ 0.9
FOXN1O15353 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FOXN1O15353 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
FOXN1O15353 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
FOXN1O15353 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms