Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.88■□□□□ 0.29
UBFD1O14562 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBFD1O14562 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBFD1O14562 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.87■□□□□ 0.29
UBFD1O14562 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBFD1O14562 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBFD1O14562 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UBFD1O14562 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBFD1O14562 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.87■□□□□ 0.29
UBFD1O14562 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.87■□□□□ 0.29
UBFD1O14562 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.87■□□□□ 0.29
UBFD1O14562 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.87■□□□□ 0.29
UBFD1O14562 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.87■□□□□ 0.29
UBFD1O14562 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UBFD1O14562 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBFD1O14562 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
UBFD1O14562 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBFD1O14562 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBFD1O14562 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.87■□□□□ 0.29
UBFD1O14562 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.87■□□□□ 0.29
UBFD1O14562 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.87■□□□□ 0.29
UBFD1O14562 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBFD1O14562 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBFD1O14562 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.87■□□□□ 0.29
UBFD1O14562 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.87■□□□□ 0.29
UBFD1O14562 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.87■□□□□ 0.29
UBFD1O14562 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.87■□□□□ 0.29
UBFD1O14562 AC091607.1-201ENST00000490318 1060 ntBASIC16.87■□□□□ 0.29
UBFD1O14562 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.87■□□□□ 0.29
UBFD1O14562 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.87■□□□□ 0.29
UBFD1O14562 STK25P1-201ENST00000585406 838 ntBASIC16.87■□□□□ 0.29
UBFD1O14562 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UBFD1O14562 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.87■□□□□ 0.29
UBFD1O14562 AC010331.1-201ENST00000611423 582 ntBASIC16.87■□□□□ 0.29
UBFD1O14562 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UBFD1O14562 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
UBFD1O14562 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBFD1O14562 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBFD1O14562 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBFD1O14562 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
UBFD1O14562 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBFD1O14562 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.86■□□□□ 0.29
UBFD1O14562 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBFD1O14562 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UBFD1O14562 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.86■□□□□ 0.29
UBFD1O14562 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UBFD1O14562 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBFD1O14562 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.86■□□□□ 0.29
UBFD1O14562 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
UBFD1O14562 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBFD1O14562 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBFD1O14562 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBFD1O14562 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UBFD1O14562 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.86■□□□□ 0.29
UBFD1O14562 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBFD1O14562 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
UBFD1O14562 RCN1P1-201ENST00000400413 996 ntBASIC16.86■□□□□ 0.29
UBFD1O14562 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.86■□□□□ 0.29
UBFD1O14562 DUX4L26-201ENST00000489078 1255 ntBASIC16.86■□□□□ 0.29
UBFD1O14562 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.86■□□□□ 0.29
UBFD1O14562 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.86■□□□□ 0.29
UBFD1O14562 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.86■□□□□ 0.29
UBFD1O14562 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.86■□□□□ 0.29
UBFD1O14562 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.86■□□□□ 0.29
UBFD1O14562 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.86■□□□□ 0.29
UBFD1O14562 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBFD1O14562 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBFD1O14562 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
UBFD1O14562 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UBFD1O14562 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.86■□□□□ 0.29
UBFD1O14562 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.86■□□□□ 0.29
UBFD1O14562 AL353593.2-201ENST00000602529 1483 ntBASIC16.86■□□□□ 0.29
UBFD1O14562 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.86■□□□□ 0.29
UBFD1O14562 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UBFD1O14562 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.86■□□□□ 0.29
UBFD1O14562 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
UBFD1O14562 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UBFD1O14562 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UBFD1O14562 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
UBFD1O14562 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UBFD1O14562 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.85■□□□□ 0.29
UBFD1O14562 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.85■□□□□ 0.29
UBFD1O14562 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBFD1O14562 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBFD1O14562 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
UBFD1O14562 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBFD1O14562 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
UBFD1O14562 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.85■□□□□ 0.29
UBFD1O14562 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
UBFD1O14562 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBFD1O14562 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UBFD1O14562 AC103564.2-201ENST00000432853 1299 ntBASIC16.85■□□□□ 0.29
UBFD1O14562 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UBFD1O14562 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.85■□□□□ 0.29
UBFD1O14562 RN7SL850P-201ENST00000579959 291 ntBASIC16.85■□□□□ 0.29
UBFD1O14562 AC090616.6-201ENST00000582640 721 ntBASIC16.85■□□□□ 0.29
UBFD1O14562 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.85■□□□□ 0.29
UBFD1O14562 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.85■□□□□ 0.29
UBFD1O14562 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.85■□□□□ 0.29
UBFD1O14562 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms