Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX39AO00148 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX39AO00148 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
DDX39AO00148 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX39AO00148 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.56■□□□□ 0.72
DDX39AO00148 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.56■□□□□ 0.72
DDX39AO00148 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
DDX39AO00148 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.56■□□□□ 0.72
DDX39AO00148 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.56■□□□□ 0.72
DDX39AO00148 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
DDX39AO00148 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.56■□□□□ 0.72
DDX39AO00148 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
DDX39AO00148 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
DDX39AO00148 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
DDX39AO00148 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
DDX39AO00148 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX39AO00148 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
DDX39AO00148 AC133963.1-201ENST00000504166 1679 ntBASIC19.56■□□□□ 0.72
DDX39AO00148 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
DDX39AO00148 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
DDX39AO00148 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
DDX39AO00148 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DDX39AO00148 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.55■□□□□ 0.72
DDX39AO00148 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
DDX39AO00148 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.55■□□□□ 0.72
DDX39AO00148 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.55■□□□□ 0.72
DDX39AO00148 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
DDX39AO00148 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.55■□□□□ 0.72
DDX39AO00148 AL139424.1-201ENST00000607572 797 ntBASIC19.55■□□□□ 0.72
DDX39AO00148 AC005593.1-201ENST00000624894 515 ntBASIC19.55■□□□□ 0.72
DDX39AO00148 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
DDX39AO00148 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DDX39AO00148 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
DDX39AO00148 ZNF259P1-201ENST00000407656 1365 ntBASIC19.55■□□□□ 0.72
DDX39AO00148 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
DDX39AO00148 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
DDX39AO00148 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
DDX39AO00148 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
DDX39AO00148 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
DDX39AO00148 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
DDX39AO00148 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDX39AO00148 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDX39AO00148 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
DDX39AO00148 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.54■□□□□ 0.72
DDX39AO00148 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDX39AO00148 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDX39AO00148 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDX39AO00148 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDX39AO00148 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.54■□□□□ 0.72
DDX39AO00148 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.54■□□□□ 0.72
DDX39AO00148 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.54■□□□□ 0.72
DDX39AO00148 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.54■□□□□ 0.72
DDX39AO00148 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
DDX39AO00148 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.54■□□□□ 0.72
DDX39AO00148 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.54■□□□□ 0.72
DDX39AO00148 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
DDX39AO00148 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.54■□□□□ 0.72
DDX39AO00148 Z83851.2-201ENST00000609564 659 ntBASIC19.54■□□□□ 0.72
DDX39AO00148 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDX39AO00148 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
DDX39AO00148 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDX39AO00148 NOC2LP2-201ENST00000407594 1944 ntBASIC19.54■□□□□ 0.72
DDX39AO00148 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDX39AO00148 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDX39AO00148 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.54■□□□□ 0.72
DDX39AO00148 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
DDX39AO00148 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.54■□□□□ 0.72
DDX39AO00148 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.54■□□□□ 0.72
DDX39AO00148 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDX39AO00148 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DDX39AO00148 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
DDX39AO00148 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
DDX39AO00148 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.53■□□□□ 0.72
DDX39AO00148 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.53■□□□□ 0.72
DDX39AO00148 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DDX39AO00148 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.53■□□□□ 0.72
DDX39AO00148 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.53■□□□□ 0.72
DDX39AO00148 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.53■□□□□ 0.72
DDX39AO00148 AC034105.1-201ENST00000563488 319 ntBASIC19.53■□□□□ 0.72
DDX39AO00148 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DDX39AO00148 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.53■□□□□ 0.72
DDX39AO00148 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
DDX39AO00148 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
DDX39AO00148 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
DDX39AO00148 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.53■□□□□ 0.72
DDX39AO00148 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
DDX39AO00148 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
DDX39AO00148 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
DDX39AO00148 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
DDX39AO00148 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.52■□□□□ 0.72
DDX39AO00148 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
DDX39AO00148 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
DDX39AO00148 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.52■□□□□ 0.72
DDX39AO00148 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.52■□□□□ 0.72
DDX39AO00148 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
DDX39AO00148 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
DDX39AO00148 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
DDX39AO00148 GNAS-203ENST00000306120 1878 ntBASIC19.52■□□□□ 0.72
DDX39AO00148 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
DDX39AO00148 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms