Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TCRBV7S3A2A0A539 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.68■□□□□ 0.42
TCRBV7S3A2A0A539 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.68■□□□□ 0.42
TCRBV7S3A2A0A539 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TCRBV7S3A2A0A539 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TCRBV7S3A2A0A539 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.68■□□□□ 0.42
TCRBV7S3A2A0A539 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TCRBV7S3A2A0A539 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.68■□□□□ 0.42
TCRBV7S3A2A0A539 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.68■□□□□ 0.42
TCRBV7S3A2A0A539 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.68■□□□□ 0.42
TCRBV7S3A2A0A539 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.68■□□□□ 0.42
TCRBV7S3A2A0A539 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TCRBV7S3A2A0A539 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.67■□□□□ 0.42
TCRBV7S3A2A0A539 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV7S3A2A0A539 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.67■□□□□ 0.42
TCRBV7S3A2A0A539 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV7S3A2A0A539 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV7S3A2A0A539 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV7S3A2A0A539 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV7S3A2A0A539 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.67■□□□□ 0.42
TCRBV7S3A2A0A539 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV7S3A2A0A539 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV7S3A2A0A539 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.67■□□□□ 0.42
TCRBV7S3A2A0A539 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV7S3A2A0A539 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TCRBV7S3A2A0A539 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV7S3A2A0A539 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV7S3A2A0A539 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.67■□□□□ 0.42
TCRBV7S3A2A0A539 FAM220CP-201ENST00000395253 831 ntBASIC17.67■□□□□ 0.42
TCRBV7S3A2A0A539 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV7S3A2A0A539 LINC01238-205ENST00000567549 1107 ntBASIC17.67■□□□□ 0.42
TCRBV7S3A2A0A539 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.67■□□□□ 0.42
TCRBV7S3A2A0A539 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV7S3A2A0A539 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.67■□□□□ 0.42
TCRBV7S3A2A0A539 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV7S3A2A0A539 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
TCRBV7S3A2A0A539 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV7S3A2A0A539 AL353593.2-201ENST00000602529 1483 ntBASIC17.67■□□□□ 0.42
TCRBV7S3A2A0A539 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV7S3A2A0A539 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.67■□□□□ 0.42
TCRBV7S3A2A0A539 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TCRBV7S3A2A0A539 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV7S3A2A0A539 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.67■□□□□ 0.42
TCRBV7S3A2A0A539 AC005332.1-201ENST00000577698 1310 ntBASIC17.67■□□□□ 0.42
TCRBV7S3A2A0A539 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.67■□□□□ 0.42
TCRBV7S3A2A0A539 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV7S3A2A0A539 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV7S3A2A0A539 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.67■□□□□ 0.42
TCRBV7S3A2A0A539 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TCRBV7S3A2A0A539 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV7S3A2A0A539 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV7S3A2A0A539 AC016734.2-201ENST00000624325 1377 ntBASIC17.66■□□□□ 0.42
TCRBV7S3A2A0A539 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TCRBV7S3A2A0A539 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV7S3A2A0A539 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TCRBV7S3A2A0A539 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV7S3A2A0A539 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.66■□□□□ 0.42
TCRBV7S3A2A0A539 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV7S3A2A0A539 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TCRBV7S3A2A0A539 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.66■□□□□ 0.42
TCRBV7S3A2A0A539 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.66■□□□□ 0.42
TCRBV7S3A2A0A539 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV7S3A2A0A539 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.66■□□□□ 0.42
TCRBV7S3A2A0A539 AC103564.2-201ENST00000432853 1299 ntBASIC17.66■□□□□ 0.42
TCRBV7S3A2A0A539 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.66■□□□□ 0.42
TCRBV7S3A2A0A539 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV7S3A2A0A539 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV7S3A2A0A539 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.66■□□□□ 0.42
TCRBV7S3A2A0A539 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV7S3A2A0A539 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TCRBV7S3A2A0A539 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.66■□□□□ 0.42
TCRBV7S3A2A0A539 AL135999.2-201ENST00000622438 1686 ntBASIC17.66■□□□□ 0.42
TCRBV7S3A2A0A539 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.66■□□□□ 0.42
TCRBV7S3A2A0A539 AC018695.7-201ENST00000624587 2492 ntBASIC17.66■□□□□ 0.42
TCRBV7S3A2A0A539 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV7S3A2A0A539 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV7S3A2A0A539 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV7S3A2A0A539 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV7S3A2A0A539 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV7S3A2A0A539 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV7S3A2A0A539 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
TCRBV7S3A2A0A539 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
TCRBV7S3A2A0A539 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV7S3A2A0A539 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV7S3A2A0A539 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TCRBV7S3A2A0A539 AC132938.5-201ENST00000624980 1813 ntBASIC17.65■□□□□ 0.42
TCRBV7S3A2A0A539 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TCRBV7S3A2A0A539 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TCRBV7S3A2A0A539 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.65■□□□□ 0.42
TCRBV7S3A2A0A539 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.65■□□□□ 0.42
TCRBV7S3A2A0A539 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
TCRBV7S3A2A0A539 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.65■□□□□ 0.42
TCRBV7S3A2A0A539 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TCRBV7S3A2A0A539 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TCRBV7S3A2A0A539 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.65■□□□□ 0.42
TCRBV7S3A2A0A539 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TCRBV7S3A2A0A539 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TCRBV7S3A2A0A539 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.65■□□□□ 0.42
TCRBV7S3A2A0A539 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TCRBV7S3A2A0A539 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms