Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
RNF103-CHMP3A0A140T963 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.81■□□□□ 0.28
RNF103-CHMP3A0A140T963 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.81■□□□□ 0.28
RNF103-CHMP3A0A140T963 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF103-CHMP3A0A140T963 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF103-CHMP3A0A140T963 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF103-CHMP3A0A140T963 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF103-CHMP3A0A140T963 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF103-CHMP3A0A140T963 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF103-CHMP3A0A140T963 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF103-CHMP3A0A140T963 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.81■□□□□ 0.28
RNF103-CHMP3A0A140T963 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF103-CHMP3A0A140T963 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.81■□□□□ 0.28
RNF103-CHMP3A0A140T963 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF103-CHMP3A0A140T963 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF103-CHMP3A0A140T963 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF103-CHMP3A0A140T963 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF103-CHMP3A0A140T963 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.81■□□□□ 0.28
RNF103-CHMP3A0A140T963 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RNF103-CHMP3A0A140T963 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF103-CHMP3A0A140T963 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF103-CHMP3A0A140T963 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
RNF103-CHMP3A0A140T963 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.81■□□□□ 0.28
RNF103-CHMP3A0A140T963 AL137013.1-201ENST00000432946 1228 ntBASIC16.81■□□□□ 0.28
RNF103-CHMP3A0A140T963 KRT18P65-201ENST00000439811 1286 ntBASIC16.81■□□□□ 0.28
RNF103-CHMP3A0A140T963 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.81■□□□□ 0.28
RNF103-CHMP3A0A140T963 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RNF103-CHMP3A0A140T963 AC005363.2-201ENST00000618631 242 ntBASIC16.81■□□□□ 0.28
RNF103-CHMP3A0A140T963 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.81■□□□□ 0.28
RNF103-CHMP3A0A140T963 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF103-CHMP3A0A140T963 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF103-CHMP3A0A140T963 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF103-CHMP3A0A140T963 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
RNF103-CHMP3A0A140T963 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF103-CHMP3A0A140T963 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.81■□□□□ 0.28
RNF103-CHMP3A0A140T963 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.81■□□□□ 0.28
RNF103-CHMP3A0A140T963 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF103-CHMP3A0A140T963 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF103-CHMP3A0A140T963 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF103-CHMP3A0A140T963 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF103-CHMP3A0A140T963 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF103-CHMP3A0A140T963 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF103-CHMP3A0A140T963 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF103-CHMP3A0A140T963 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF103-CHMP3A0A140T963 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF103-CHMP3A0A140T963 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF103-CHMP3A0A140T963 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF103-CHMP3A0A140T963 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF103-CHMP3A0A140T963 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF103-CHMP3A0A140T963 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RNF103-CHMP3A0A140T963 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RNF103-CHMP3A0A140T963 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF103-CHMP3A0A140T963 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RNF103-CHMP3A0A140T963 AC009949.1-201ENST00000623048 1830 ntBASIC16.8■□□□□ 0.28
RNF103-CHMP3A0A140T963 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
RNF103-CHMP3A0A140T963 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF103-CHMP3A0A140T963 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.8■□□□□ 0.28
RNF103-CHMP3A0A140T963 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF103-CHMP3A0A140T963 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF103-CHMP3A0A140T963 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF103-CHMP3A0A140T963 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.8■□□□□ 0.28
RNF103-CHMP3A0A140T963 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.8■□□□□ 0.28
RNF103-CHMP3A0A140T963 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF103-CHMP3A0A140T963 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF103-CHMP3A0A140T963 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.8■□□□□ 0.28
RNF103-CHMP3A0A140T963 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.8■□□□□ 0.28
RNF103-CHMP3A0A140T963 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF103-CHMP3A0A140T963 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.8■□□□□ 0.28
RNF103-CHMP3A0A140T963 AC073912.3-201ENST00000624414 853 ntBASIC16.8■□□□□ 0.28
RNF103-CHMP3A0A140T963 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF103-CHMP3A0A140T963 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF103-CHMP3A0A140T963 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.8■□□□□ 0.28
RNF103-CHMP3A0A140T963 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.8■□□□□ 0.28
RNF103-CHMP3A0A140T963 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
RNF103-CHMP3A0A140T963 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF103-CHMP3A0A140T963 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.79■□□□□ 0.28
RNF103-CHMP3A0A140T963 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF103-CHMP3A0A140T963 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.79■□□□□ 0.28
RNF103-CHMP3A0A140T963 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.79■□□□□ 0.28
RNF103-CHMP3A0A140T963 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF103-CHMP3A0A140T963 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF103-CHMP3A0A140T963 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF103-CHMP3A0A140T963 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF103-CHMP3A0A140T963 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.79■□□□□ 0.28
RNF103-CHMP3A0A140T963 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF103-CHMP3A0A140T963 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF103-CHMP3A0A140T963 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.79■□□□□ 0.28
RNF103-CHMP3A0A140T963 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.79■□□□□ 0.28
RNF103-CHMP3A0A140T963 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF103-CHMP3A0A140T963 AC011270.2-201ENST00000624293 2550 ntBASIC16.79■□□□□ 0.28
RNF103-CHMP3A0A140T963 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.79■□□□□ 0.28
RNF103-CHMP3A0A140T963 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RNF103-CHMP3A0A140T963 TERF1P1-201ENST00000311003 1181 ntBASIC16.79■□□□□ 0.28
RNF103-CHMP3A0A140T963 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF103-CHMP3A0A140T963 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF103-CHMP3A0A140T963 KRT18P48-201ENST00000434763 852 ntBASIC16.79■□□□□ 0.28
RNF103-CHMP3A0A140T963 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF103-CHMP3A0A140T963 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
RNF103-CHMP3A0A140T963 AC011558.1-201ENST00000623459 338 ntBASIC16.79■□□□□ 0.28
RNF103-CHMP3A0A140T963 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms