Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRGV5A0A0B4J1U4 AL590787.1-201ENST00000568856 1315 ntBASIC15.58■□□□□ 0.08
TRGV5A0A0B4J1U4 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRGV5A0A0B4J1U4 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
TRGV5A0A0B4J1U4 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.58■□□□□ 0.08
TRGV5A0A0B4J1U4 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRGV5A0A0B4J1U4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC15.58■□□□□ 0.08
TRGV5A0A0B4J1U4 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRGV5A0A0B4J1U4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRGV5A0A0B4J1U4 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRGV5A0A0B4J1U4 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.58■□□□□ 0.08
TRGV5A0A0B4J1U4 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRGV5A0A0B4J1U4 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRGV5A0A0B4J1U4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRGV5A0A0B4J1U4 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TRGV5A0A0B4J1U4 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRGV5A0A0B4J1U4 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRGV5A0A0B4J1U4 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRGV5A0A0B4J1U4 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRGV5A0A0B4J1U4 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRGV5A0A0B4J1U4 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC15.57■□□□□ 0.08
TRGV5A0A0B4J1U4 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRGV5A0A0B4J1U4 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRGV5A0A0B4J1U4 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
TRGV5A0A0B4J1U4 UPF3AP3-201ENST00000420996 769 ntBASIC15.57■□□□□ 0.08
TRGV5A0A0B4J1U4 AC004832.2-201ENST00000426397 482 ntBASIC15.57■□□□□ 0.08
TRGV5A0A0B4J1U4 HCG4B-203ENST00000450128 991 ntBASIC15.57■□□□□ 0.08
TRGV5A0A0B4J1U4 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.57■□□□□ 0.08
TRGV5A0A0B4J1U4 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.57■□□□□ 0.08
TRGV5A0A0B4J1U4 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.57■□□□□ 0.08
TRGV5A0A0B4J1U4 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.57■□□□□ 0.08
TRGV5A0A0B4J1U4 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.57■□□□□ 0.08
TRGV5A0A0B4J1U4 AC010327.4-202ENST00000591484 748 ntBASIC15.57■□□□□ 0.08
TRGV5A0A0B4J1U4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRGV5A0A0B4J1U4 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRGV5A0A0B4J1U4 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TRGV5A0A0B4J1U4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRGV5A0A0B4J1U4 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC15.57■□□□□ 0.08
TRGV5A0A0B4J1U4 AL390961.4-201ENST00000623958 2535 ntBASIC15.57■□□□□ 0.08
TRGV5A0A0B4J1U4 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TRGV5A0A0B4J1U4 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.57■□□□□ 0.08
TRGV5A0A0B4J1U4 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRGV5A0A0B4J1U4 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRGV5A0A0B4J1U4 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRGV5A0A0B4J1U4 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRGV5A0A0B4J1U4 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRGV5A0A0B4J1U4 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV5A0A0B4J1U4 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV5A0A0B4J1U4 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC15.56■□□□□ 0.08
TRGV5A0A0B4J1U4 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV5A0A0B4J1U4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.56■□□□□ 0.08
TRGV5A0A0B4J1U4 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TRGV5A0A0B4J1U4 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV5A0A0B4J1U4 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV5A0A0B4J1U4 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV5A0A0B4J1U4 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV5A0A0B4J1U4 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV5A0A0B4J1U4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV5A0A0B4J1U4 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV5A0A0B4J1U4 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.56■□□□□ 0.08
TRGV5A0A0B4J1U4 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV5A0A0B4J1U4 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
TRGV5A0A0B4J1U4 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.56■□□□□ 0.08
TRGV5A0A0B4J1U4 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.56■□□□□ 0.08
TRGV5A0A0B4J1U4 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.56■□□□□ 0.08
TRGV5A0A0B4J1U4 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.56■□□□□ 0.08
TRGV5A0A0B4J1U4 MTDHP5-201ENST00000598980 586 ntBASIC15.56■□□□□ 0.08
TRGV5A0A0B4J1U4 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
TRGV5A0A0B4J1U4 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.56■□□□□ 0.08
TRGV5A0A0B4J1U4 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV5A0A0B4J1U4 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV5A0A0B4J1U4 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TRGV5A0A0B4J1U4 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV5A0A0B4J1U4 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.56■□□□□ 0.08
TRGV5A0A0B4J1U4 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.56■□□□□ 0.08
TRGV5A0A0B4J1U4 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV5A0A0B4J1U4 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV5A0A0B4J1U4 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC15.56■□□□□ 0.08
TRGV5A0A0B4J1U4 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV5A0A0B4J1U4 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRGV5A0A0B4J1U4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRGV5A0A0B4J1U4 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRGV5A0A0B4J1U4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRGV5A0A0B4J1U4 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRGV5A0A0B4J1U4 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRGV5A0A0B4J1U4 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TRGV5A0A0B4J1U4 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.55■□□□□ 0.08
TRGV5A0A0B4J1U4 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRGV5A0A0B4J1U4 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.55■□□□□ 0.08
TRGV5A0A0B4J1U4 AC002310.6-201ENST00000624451 1377 ntBASIC15.55■□□□□ 0.08
TRGV5A0A0B4J1U4 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRGV5A0A0B4J1U4 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.55■□□□□ 0.08
TRGV5A0A0B4J1U4 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.55■□□□□ 0.08
TRGV5A0A0B4J1U4 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.55■□□□□ 0.08
TRGV5A0A0B4J1U4 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.55■□□□□ 0.08
TRGV5A0A0B4J1U4 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.55■□□□□ 0.08
TRGV5A0A0B4J1U4 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.55■□□□□ 0.08
TRGV5A0A0B4J1U4 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.55■□□□□ 0.08
TRGV5A0A0B4J1U4 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.55■□□□□ 0.08
TRGV5A0A0B4J1U4 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms