Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 AC190387.1-201ENST00000551683 408 ntBASIC18.07■□□□□ 0.48
HCFC2Q9Y5Z7 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HCFC2Q9Y5Z7 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.07■□□□□ 0.48
HCFC2Q9Y5Z7 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.07■□□□□ 0.48
HCFC2Q9Y5Z7 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
HCFC2Q9Y5Z7 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.07■□□□□ 0.48
HCFC2Q9Y5Z7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.07■□□□□ 0.48
HCFC2Q9Y5Z7 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HCFC2Q9Y5Z7 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
HCFC2Q9Y5Z7 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HCFC2Q9Y5Z7 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
HCFC2Q9Y5Z7 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.07■□□□□ 0.48
HCFC2Q9Y5Z7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HCFC2Q9Y5Z7 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HCFC2Q9Y5Z7 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HCFC2Q9Y5Z7 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HCFC2Q9Y5Z7 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.06■□□□□ 0.48
HCFC2Q9Y5Z7 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HCFC2Q9Y5Z7 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HCFC2Q9Y5Z7 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HCFC2Q9Y5Z7 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
HCFC2Q9Y5Z7 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HCFC2Q9Y5Z7 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
HCFC2Q9Y5Z7 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.06■□□□□ 0.48
HCFC2Q9Y5Z7 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HCFC2Q9Y5Z7 AC004408.2-201ENST00000623613 2777 ntBASIC18.06■□□□□ 0.48
HCFC2Q9Y5Z7 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
HCFC2Q9Y5Z7 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HCFC2Q9Y5Z7 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
HCFC2Q9Y5Z7 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HCFC2Q9Y5Z7 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.06■□□□□ 0.48
HCFC2Q9Y5Z7 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HCFC2Q9Y5Z7 TFAMP1-201ENST00000412727 736 ntBASIC18.06■□□□□ 0.48
HCFC2Q9Y5Z7 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.06■□□□□ 0.48
HCFC2Q9Y5Z7 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.06■□□□□ 0.48
HCFC2Q9Y5Z7 KRT18P32-201ENST00000424695 1287 ntBASIC18.06■□□□□ 0.48
HCFC2Q9Y5Z7 INGX-202ENST00000489074 768 ntBASIC18.06■□□□□ 0.48
HCFC2Q9Y5Z7 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.06■□□□□ 0.48
HCFC2Q9Y5Z7 AC107918.2-201ENST00000530817 355 ntBASIC18.06■□□□□ 0.48
HCFC2Q9Y5Z7 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.06■□□□□ 0.48
HCFC2Q9Y5Z7 AC051619.7-201ENST00000568314 623 ntBASIC18.06■□□□□ 0.48
HCFC2Q9Y5Z7 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HCFC2Q9Y5Z7 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.06■□□□□ 0.48
HCFC2Q9Y5Z7 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HCFC2Q9Y5Z7 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HCFC2Q9Y5Z7 REXO1L11P-201ENST00000620964 1927 ntBASIC18.06■□□□□ 0.48
HCFC2Q9Y5Z7 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.06■□□□□ 0.48
HCFC2Q9Y5Z7 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
HCFC2Q9Y5Z7 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.05■□□□□ 0.48
HCFC2Q9Y5Z7 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HCFC2Q9Y5Z7 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.05■□□□□ 0.48
HCFC2Q9Y5Z7 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.05■□□□□ 0.48
HCFC2Q9Y5Z7 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.05■□□□□ 0.48
HCFC2Q9Y5Z7 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
HCFC2Q9Y5Z7 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.05■□□□□ 0.48
HCFC2Q9Y5Z7 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HCFC2Q9Y5Z7 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HCFC2Q9Y5Z7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HCFC2Q9Y5Z7 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HCFC2Q9Y5Z7 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.05■□□□□ 0.48
HCFC2Q9Y5Z7 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.05■□□□□ 0.48
HCFC2Q9Y5Z7 FAM58DP-201ENST00000428076 619 ntBASIC18.05■□□□□ 0.48
HCFC2Q9Y5Z7 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.05■□□□□ 0.48
HCFC2Q9Y5Z7 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
HCFC2Q9Y5Z7 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.05■□□□□ 0.48
HCFC2Q9Y5Z7 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.05■□□□□ 0.48
HCFC2Q9Y5Z7 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.05■□□□□ 0.48
HCFC2Q9Y5Z7 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HCFC2Q9Y5Z7 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.05■□□□□ 0.48
HCFC2Q9Y5Z7 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.05■□□□□ 0.48
HCFC2Q9Y5Z7 AC243562.1-201ENST00000560672 389 ntBASIC18.05■□□□□ 0.48
HCFC2Q9Y5Z7 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HCFC2Q9Y5Z7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.05■□□□□ 0.48
HCFC2Q9Y5Z7 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
HCFC2Q9Y5Z7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HCFC2Q9Y5Z7 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.05■□□□□ 0.48
HCFC2Q9Y5Z7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
HCFC2Q9Y5Z7 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.05■□□□□ 0.48
HCFC2Q9Y5Z7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HCFC2Q9Y5Z7 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HCFC2Q9Y5Z7 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
HCFC2Q9Y5Z7 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HCFC2Q9Y5Z7 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HCFC2Q9Y5Z7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.05■□□□□ 0.48
HCFC2Q9Y5Z7 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HCFC2Q9Y5Z7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.05■□□□□ 0.48
HCFC2Q9Y5Z7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.05■□□□□ 0.48
HCFC2Q9Y5Z7 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.04■□□□□ 0.48
HCFC2Q9Y5Z7 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.04■□□□□ 0.48
HCFC2Q9Y5Z7 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HCFC2Q9Y5Z7 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HCFC2Q9Y5Z7 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.04■□□□□ 0.48
HCFC2Q9Y5Z7 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HCFC2Q9Y5Z7 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HCFC2Q9Y5Z7 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HCFC2Q9Y5Z7 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
HCFC2Q9Y5Z7 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HCFC2Q9Y5Z7 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HCFC2Q9Y5Z7 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HCFC2Q9Y5Z7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms