Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP4S1Q9Y587 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.5■□□□□ 0.23
AP4S1Q9Y587 AC005104.2-201ENST00000427818 678 ntBASIC16.5■□□□□ 0.23
AP4S1Q9Y587 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.5■□□□□ 0.23
AP4S1Q9Y587 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.5■□□□□ 0.23
AP4S1Q9Y587 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.5■□□□□ 0.23
AP4S1Q9Y587 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.5■□□□□ 0.23
AP4S1Q9Y587 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.5■□□□□ 0.23
AP4S1Q9Y587 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP4S1Q9Y587 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
AP4S1Q9Y587 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP4S1Q9Y587 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AP4S1Q9Y587 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP4S1Q9Y587 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AP4S1Q9Y587 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP4S1Q9Y587 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
AP4S1Q9Y587 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP4S1Q9Y587 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP4S1Q9Y587 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP4S1Q9Y587 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
AP4S1Q9Y587 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP4S1Q9Y587 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP4S1Q9Y587 TSPY26P-202ENST00000565928 3884 ntBASIC16.49■□□□□ 0.23
AP4S1Q9Y587 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP4S1Q9Y587 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.49■□□□□ 0.23
AP4S1Q9Y587 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP4S1Q9Y587 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.49■□□□□ 0.23
AP4S1Q9Y587 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
AP4S1Q9Y587 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP4S1Q9Y587 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP4S1Q9Y587 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP4S1Q9Y587 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP4S1Q9Y587 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.49■□□□□ 0.23
AP4S1Q9Y587 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
AP4S1Q9Y587 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
AP4S1Q9Y587 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
AP4S1Q9Y587 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP4S1Q9Y587 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
AP4S1Q9Y587 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
AP4S1Q9Y587 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP4S1Q9Y587 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
AP4S1Q9Y587 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP4S1Q9Y587 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.49■□□□□ 0.23
AP4S1Q9Y587 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.49■□□□□ 0.23
AP4S1Q9Y587 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.49■□□□□ 0.23
AP4S1Q9Y587 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.49■□□□□ 0.23
AP4S1Q9Y587 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.49■□□□□ 0.23
AP4S1Q9Y587 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.49■□□□□ 0.23
AP4S1Q9Y587 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP4S1Q9Y587 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP4S1Q9Y587 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
AP4S1Q9Y587 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP4S1Q9Y587 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
AP4S1Q9Y587 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.49■□□□□ 0.23
AP4S1Q9Y587 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
AP4S1Q9Y587 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.49■□□□□ 0.23
AP4S1Q9Y587 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.49■□□□□ 0.23
AP4S1Q9Y587 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
AP4S1Q9Y587 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
AP4S1Q9Y587 KRT8P47-201ENST00000604727 1398 ntBASIC16.49■□□□□ 0.23
AP4S1Q9Y587 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
AP4S1Q9Y587 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
AP4S1Q9Y587 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP4S1Q9Y587 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.49■□□□□ 0.23
AP4S1Q9Y587 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.48■□□□□ 0.23
AP4S1Q9Y587 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP4S1Q9Y587 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
AP4S1Q9Y587 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP4S1Q9Y587 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.48■□□□□ 0.23
AP4S1Q9Y587 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP4S1Q9Y587 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
AP4S1Q9Y587 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP4S1Q9Y587 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
AP4S1Q9Y587 AC093525.9-201ENST00000624961 1746 ntBASIC16.48■□□□□ 0.23
AP4S1Q9Y587 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.48■□□□□ 0.23
AP4S1Q9Y587 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
AP4S1Q9Y587 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
AP4S1Q9Y587 AC097488.1-201ENST00000507834 756 ntBASIC16.48■□□□□ 0.23
AP4S1Q9Y587 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.48■□□□□ 0.23
AP4S1Q9Y587 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
AP4S1Q9Y587 GXYLT1P5-201ENST00000614548 1189 ntBASIC16.48■□□□□ 0.23
AP4S1Q9Y587 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
AP4S1Q9Y587 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.48■□□□□ 0.23
AP4S1Q9Y587 BX276092.7-203ENST00000637198 1536 ntBASIC16.48■□□□□ 0.23
AP4S1Q9Y587 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.48■□□□□ 0.23
AP4S1Q9Y587 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP4S1Q9Y587 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
AP4S1Q9Y587 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP4S1Q9Y587 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
AP4S1Q9Y587 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
AP4S1Q9Y587 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP4S1Q9Y587 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP4S1Q9Y587 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP4S1Q9Y587 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP4S1Q9Y587 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.47■□□□□ 0.23
AP4S1Q9Y587 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
AP4S1Q9Y587 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
AP4S1Q9Y587 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP4S1Q9Y587 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
AP4S1Q9Y587 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms