Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
R3HCC1Q9Y3T6 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
R3HCC1Q9Y3T6 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20■□□□□ 0.79
R3HCC1Q9Y3T6 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
R3HCC1Q9Y3T6 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC20■□□□□ 0.79
R3HCC1Q9Y3T6 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
R3HCC1Q9Y3T6 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20■□□□□ 0.79
R3HCC1Q9Y3T6 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
R3HCC1Q9Y3T6 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
R3HCC1Q9Y3T6 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
R3HCC1Q9Y3T6 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
R3HCC1Q9Y3T6 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
R3HCC1Q9Y3T6 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
R3HCC1Q9Y3T6 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
R3HCC1Q9Y3T6 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20■□□□□ 0.79
R3HCC1Q9Y3T6 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20■□□□□ 0.79
R3HCC1Q9Y3T6 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20■□□□□ 0.79
R3HCC1Q9Y3T6 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20■□□□□ 0.79
R3HCC1Q9Y3T6 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20■□□□□ 0.79
R3HCC1Q9Y3T6 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20■□□□□ 0.79
R3HCC1Q9Y3T6 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20■□□□□ 0.79
R3HCC1Q9Y3T6 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20■□□□□ 0.79
R3HCC1Q9Y3T6 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC20■□□□□ 0.79
R3HCC1Q9Y3T6 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC20■□□□□ 0.79
R3HCC1Q9Y3T6 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
R3HCC1Q9Y3T6 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
R3HCC1Q9Y3T6 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
R3HCC1Q9Y3T6 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
R3HCC1Q9Y3T6 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
R3HCC1Q9Y3T6 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
R3HCC1Q9Y3T6 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
R3HCC1Q9Y3T6 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
R3HCC1Q9Y3T6 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20■□□□□ 0.79
R3HCC1Q9Y3T6 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20■□□□□ 0.79
R3HCC1Q9Y3T6 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
R3HCC1Q9Y3T6 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
R3HCC1Q9Y3T6 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
R3HCC1Q9Y3T6 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
R3HCC1Q9Y3T6 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
R3HCC1Q9Y3T6 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
R3HCC1Q9Y3T6 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
R3HCC1Q9Y3T6 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
R3HCC1Q9Y3T6 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
R3HCC1Q9Y3T6 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
R3HCC1Q9Y3T6 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.99■□□□□ 0.79
R3HCC1Q9Y3T6 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
R3HCC1Q9Y3T6 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.99■□□□□ 0.79
R3HCC1Q9Y3T6 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.99■□□□□ 0.79
R3HCC1Q9Y3T6 AC063952.2-201ENST00000498792 1227 ntBASIC19.99■□□□□ 0.79
R3HCC1Q9Y3T6 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.99■□□□□ 0.79
R3HCC1Q9Y3T6 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
R3HCC1Q9Y3T6 AC022616.7-201ENST00000525383 220 ntBASIC19.99■□□□□ 0.79
R3HCC1Q9Y3T6 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.99■□□□□ 0.79
R3HCC1Q9Y3T6 AC104390.1-201ENST00000555663 520 ntBASIC19.99■□□□□ 0.79
R3HCC1Q9Y3T6 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.99■□□□□ 0.79
R3HCC1Q9Y3T6 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.99■□□□□ 0.79
R3HCC1Q9Y3T6 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.99■□□□□ 0.79
R3HCC1Q9Y3T6 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
R3HCC1Q9Y3T6 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
R3HCC1Q9Y3T6 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
R3HCC1Q9Y3T6 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.99■□□□□ 0.79
R3HCC1Q9Y3T6 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
R3HCC1Q9Y3T6 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
R3HCC1Q9Y3T6 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.99■□□□□ 0.79
R3HCC1Q9Y3T6 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
R3HCC1Q9Y3T6 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.99■□□□□ 0.79
R3HCC1Q9Y3T6 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
R3HCC1Q9Y3T6 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
R3HCC1Q9Y3T6 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
R3HCC1Q9Y3T6 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
R3HCC1Q9Y3T6 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
R3HCC1Q9Y3T6 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
R3HCC1Q9Y3T6 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
R3HCC1Q9Y3T6 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
R3HCC1Q9Y3T6 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
R3HCC1Q9Y3T6 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
R3HCC1Q9Y3T6 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
R3HCC1Q9Y3T6 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.98■□□□□ 0.79
R3HCC1Q9Y3T6 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
R3HCC1Q9Y3T6 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.98■□□□□ 0.79
R3HCC1Q9Y3T6 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
R3HCC1Q9Y3T6 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
R3HCC1Q9Y3T6 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.98■□□□□ 0.79
R3HCC1Q9Y3T6 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.98■□□□□ 0.79
R3HCC1Q9Y3T6 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.98■□□□□ 0.79
R3HCC1Q9Y3T6 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.98■□□□□ 0.79
R3HCC1Q9Y3T6 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
R3HCC1Q9Y3T6 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
R3HCC1Q9Y3T6 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
R3HCC1Q9Y3T6 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
R3HCC1Q9Y3T6 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
R3HCC1Q9Y3T6 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.98■□□□□ 0.79
R3HCC1Q9Y3T6 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
R3HCC1Q9Y3T6 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC19.98■□□□□ 0.79
R3HCC1Q9Y3T6 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
R3HCC1Q9Y3T6 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
R3HCC1Q9Y3T6 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
R3HCC1Q9Y3T6 AC023824.1-201ENST00000562945 2975 ntBASIC19.98■□□□□ 0.79
R3HCC1Q9Y3T6 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
R3HCC1Q9Y3T6 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms