Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 AL158211.3-201ENST00000607385 239 ntBASIC20.73■□□□□ 0.91
ZNRF3Q9ULT6 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.73■□□□□ 0.91
ZNRF3Q9ULT6 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
ZNRF3Q9ULT6 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
ZNRF3Q9ULT6 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
ZNRF3Q9ULT6 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNRF3Q9ULT6 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
ZNRF3Q9ULT6 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
ZNRF3Q9ULT6 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ZNRF3Q9ULT6 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNRF3Q9ULT6 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNRF3Q9ULT6 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNRF3Q9ULT6 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.72■□□□□ 0.91
ZNRF3Q9ULT6 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.72■□□□□ 0.91
ZNRF3Q9ULT6 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ZNRF3Q9ULT6 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC20.72■□□□□ 0.91
ZNRF3Q9ULT6 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNRF3Q9ULT6 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC20.72■□□□□ 0.91
ZNRF3Q9ULT6 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC20.72■□□□□ 0.91
ZNRF3Q9ULT6 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC20.72■□□□□ 0.91
ZNRF3Q9ULT6 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC20.72■□□□□ 0.91
ZNRF3Q9ULT6 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC20.72■□□□□ 0.91
ZNRF3Q9ULT6 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC20.72■□□□□ 0.91
ZNRF3Q9ULT6 AL139327.4-201ENST00000612362 153 ntBASIC20.72■□□□□ 0.91
ZNRF3Q9ULT6 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.72■□□□□ 0.91
ZNRF3Q9ULT6 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC20.72■□□□□ 0.91
ZNRF3Q9ULT6 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNRF3Q9ULT6 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.72■□□□□ 0.91
ZNRF3Q9ULT6 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNRF3Q9ULT6 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNRF3Q9ULT6 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ZNRF3Q9ULT6 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNRF3Q9ULT6 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ZNRF3Q9ULT6 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.71■□□□□ 0.91
ZNRF3Q9ULT6 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNRF3Q9ULT6 REXO1L11P-201ENST00000620964 1927 ntBASIC20.71■□□□□ 0.91
ZNRF3Q9ULT6 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNRF3Q9ULT6 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
ZNRF3Q9ULT6 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ZNRF3Q9ULT6 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ZNRF3Q9ULT6 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNRF3Q9ULT6 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ZNRF3Q9ULT6 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC20.71■□□□□ 0.91
ZNRF3Q9ULT6 AL512638.1-201ENST00000457493 794 ntBASIC20.71■□□□□ 0.91
ZNRF3Q9ULT6 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC20.71■□□□□ 0.91
ZNRF3Q9ULT6 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC20.71■□□□□ 0.91
ZNRF3Q9ULT6 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNRF3Q9ULT6 COX11-202ENST00000571584 1108 ntTSL 2 BASIC20.71■□□□□ 0.91
ZNRF3Q9ULT6 AL009183.1-201ENST00000603760 355 ntBASIC20.71■□□□□ 0.91
ZNRF3Q9ULT6 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC20.71■□□□□ 0.91
ZNRF3Q9ULT6 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC20.71■□□□□ 0.91
ZNRF3Q9ULT6 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNRF3Q9ULT6 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNRF3Q9ULT6 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNRF3Q9ULT6 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
ZNRF3Q9ULT6 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
ZNRF3Q9ULT6 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNRF3Q9ULT6 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ZNRF3Q9ULT6 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
ZNRF3Q9ULT6 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNRF3Q9ULT6 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
ZNRF3Q9ULT6 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ZNRF3Q9ULT6 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
ZNRF3Q9ULT6 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNRF3Q9ULT6 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNRF3Q9ULT6 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ZNRF3Q9ULT6 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNRF3Q9ULT6 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ZNRF3Q9ULT6 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNRF3Q9ULT6 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
ZNRF3Q9ULT6 AC097493.3-201ENST00000509725 367 ntBASIC20.7■□□□□ 0.9
ZNRF3Q9ULT6 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC20.7■□□□□ 0.9
ZNRF3Q9ULT6 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC20.7■□□□□ 0.9
ZNRF3Q9ULT6 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNRF3Q9ULT6 CECR7-204ENST00000609932 568 ntTSL 2 BASIC20.7■□□□□ 0.9
ZNRF3Q9ULT6 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ZNRF3Q9ULT6 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNRF3Q9ULT6 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.7■□□□□ 0.9
ZNRF3Q9ULT6 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
ZNRF3Q9ULT6 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC20.7■□□□□ 0.9
ZNRF3Q9ULT6 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNRF3Q9ULT6 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.7■□□□□ 0.9
ZNRF3Q9ULT6 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNRF3Q9ULT6 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC20.7■□□□□ 0.9
ZNRF3Q9ULT6 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNRF3Q9ULT6 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.69■□□□□ 0.9
ZNRF3Q9ULT6 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNRF3Q9ULT6 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
ZNRF3Q9ULT6 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
ZNRF3Q9ULT6 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNRF3Q9ULT6 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
ZNRF3Q9ULT6 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
ZNRF3Q9ULT6 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC20.69■□□□□ 0.9
ZNRF3Q9ULT6 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC20.69■□□□□ 0.9
ZNRF3Q9ULT6 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ZNRF3Q9ULT6 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC20.69■□□□□ 0.9
ZNRF3Q9ULT6 AC069120.2-201ENST00000524091 540 ntBASIC20.69■□□□□ 0.9
ZNRF3Q9ULT6 AP005018.1-201ENST00000525475 301 ntBASIC20.69■□□□□ 0.9
ZNRF3Q9ULT6 GATD1-206ENST00000526325 756 ntTSL 5 BASIC20.69■□□□□ 0.9
ZNRF3Q9ULT6 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms