Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
HACD3Q9P035 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
HACD3Q9P035 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HACD3Q9P035 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.64■□□□□ 0.41
HACD3Q9P035 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.64■□□□□ 0.41
HACD3Q9P035 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
HACD3Q9P035 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
HACD3Q9P035 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.64■□□□□ 0.41
HACD3Q9P035 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HACD3Q9P035 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HACD3Q9P035 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HACD3Q9P035 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
HACD3Q9P035 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HACD3Q9P035 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.63■□□□□ 0.41
HACD3Q9P035 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.63■□□□□ 0.41
HACD3Q9P035 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HACD3Q9P035 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HACD3Q9P035 AL353593.2-201ENST00000602529 1483 ntBASIC17.63■□□□□ 0.41
HACD3Q9P035 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
HACD3Q9P035 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HACD3Q9P035 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
HACD3Q9P035 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HACD3Q9P035 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
HACD3Q9P035 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.63■□□□□ 0.41
HACD3Q9P035 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.63■□□□□ 0.41
HACD3Q9P035 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.63■□□□□ 0.41
HACD3Q9P035 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.63■□□□□ 0.41
HACD3Q9P035 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.63■□□□□ 0.41
HACD3Q9P035 AL139327.4-201ENST00000612362 153 ntBASIC17.63■□□□□ 0.41
HACD3Q9P035 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HACD3Q9P035 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.63■□□□□ 0.41
HACD3Q9P035 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HACD3Q9P035 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.63■□□□□ 0.41
HACD3Q9P035 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.63■□□□□ 0.41
HACD3Q9P035 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
HACD3Q9P035 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HACD3Q9P035 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HACD3Q9P035 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HACD3Q9P035 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HACD3Q9P035 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HACD3Q9P035 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HACD3Q9P035 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HACD3Q9P035 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HACD3Q9P035 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HACD3Q9P035 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.62■□□□□ 0.41
HACD3Q9P035 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HACD3Q9P035 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HACD3Q9P035 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.62■□□□□ 0.41
HACD3Q9P035 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HACD3Q9P035 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.62■□□□□ 0.41
HACD3Q9P035 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HACD3Q9P035 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
HACD3Q9P035 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
HACD3Q9P035 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HACD3Q9P035 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HACD3Q9P035 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HACD3Q9P035 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HACD3Q9P035 NUS1P2-201ENST00000417358 873 ntBASIC17.62■□□□□ 0.41
HACD3Q9P035 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.62■□□□□ 0.41
HACD3Q9P035 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HACD3Q9P035 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.62■□□□□ 0.41
HACD3Q9P035 MIR5100-201ENST00000579544 119 ntBASIC17.62■□□□□ 0.41
HACD3Q9P035 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.62■□□□□ 0.41
HACD3Q9P035 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.62■□□□□ 0.41
HACD3Q9P035 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
HACD3Q9P035 AC138894.3-201ENST00000603787 634 ntBASIC17.62■□□□□ 0.41
HACD3Q9P035 AL121772.3-201ENST00000610840 674 ntBASIC17.62■□□□□ 0.41
HACD3Q9P035 AD001527.2-201ENST00000622994 785 ntBASIC17.62■□□□□ 0.41
HACD3Q9P035 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
HACD3Q9P035 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HACD3Q9P035 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.62■□□□□ 0.41
HACD3Q9P035 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.62■□□□□ 0.41
HACD3Q9P035 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HACD3Q9P035 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.62■□□□□ 0.41
HACD3Q9P035 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HACD3Q9P035 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.62■□□□□ 0.41
HACD3Q9P035 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HACD3Q9P035 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HACD3Q9P035 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
HACD3Q9P035 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HACD3Q9P035 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HACD3Q9P035 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.61■□□□□ 0.41
HACD3Q9P035 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HACD3Q9P035 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HACD3Q9P035 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
HACD3Q9P035 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
HACD3Q9P035 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HACD3Q9P035 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HACD3Q9P035 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HACD3Q9P035 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.61■□□□□ 0.41
HACD3Q9P035 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HACD3Q9P035 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.61■□□□□ 0.41
HACD3Q9P035 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.61■□□□□ 0.41
HACD3Q9P035 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.61■□□□□ 0.41
HACD3Q9P035 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.61■□□□□ 0.41
HACD3Q9P035 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
HACD3Q9P035 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.61■□□□□ 0.41
HACD3Q9P035 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HACD3Q9P035 AL591684.3-201ENST00000605187 298 ntBASIC17.61■□□□□ 0.41
HACD3Q9P035 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms