Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PRDM9Q9NQV7 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRDM9Q9NQV7 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.46■□□□□ 0.23
PRDM9Q9NQV7 SIGLEC16-201ENST00000599858 1437 ntBASIC16.46■□□□□ 0.23
PRDM9Q9NQV7 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.46■□□□□ 0.23
PRDM9Q9NQV7 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRDM9Q9NQV7 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRDM9Q9NQV7 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRDM9Q9NQV7 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRDM9Q9NQV7 AC079776.2-201ENST00000641154 1609 ntBASIC16.46■□□□□ 0.23
PRDM9Q9NQV7 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRDM9Q9NQV7 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRDM9Q9NQV7 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRDM9Q9NQV7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRDM9Q9NQV7 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRDM9Q9NQV7 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRDM9Q9NQV7 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRDM9Q9NQV7 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRDM9Q9NQV7 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.46■□□□□ 0.23
PRDM9Q9NQV7 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.46■□□□□ 0.23
PRDM9Q9NQV7 KLF4P1-201ENST00000412782 1185 ntBASIC16.46■□□□□ 0.23
PRDM9Q9NQV7 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.46■□□□□ 0.23
PRDM9Q9NQV7 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRDM9Q9NQV7 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRDM9Q9NQV7 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.46■□□□□ 0.23
PRDM9Q9NQV7 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.46■□□□□ 0.23
PRDM9Q9NQV7 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.46■□□□□ 0.23
PRDM9Q9NQV7 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.46■□□□□ 0.23
PRDM9Q9NQV7 AC104692.2-201ENST00000603054 253 ntBASIC16.46■□□□□ 0.23
PRDM9Q9NQV7 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PRDM9Q9NQV7 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.46■□□□□ 0.23
PRDM9Q9NQV7 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRDM9Q9NQV7 AC132938.5-201ENST00000624980 1813 ntBASIC16.46■□□□□ 0.23
PRDM9Q9NQV7 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PRDM9Q9NQV7 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PRDM9Q9NQV7 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.46■□□□□ 0.23
PRDM9Q9NQV7 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRDM9Q9NQV7 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRDM9Q9NQV7 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRDM9Q9NQV7 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRDM9Q9NQV7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRDM9Q9NQV7 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRDM9Q9NQV7 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.46■□□□□ 0.23
PRDM9Q9NQV7 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
PRDM9Q9NQV7 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
PRDM9Q9NQV7 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.22
PRDM9Q9NQV7 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.45■□□□□ 0.22
PRDM9Q9NQV7 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRDM9Q9NQV7 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.45■□□□□ 0.22
PRDM9Q9NQV7 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRDM9Q9NQV7 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.45■□□□□ 0.22
PRDM9Q9NQV7 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
PRDM9Q9NQV7 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRDM9Q9NQV7 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
PRDM9Q9NQV7 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRDM9Q9NQV7 SPDYE21P-201ENST00000413323 827 ntBASIC16.45■□□□□ 0.22
PRDM9Q9NQV7 STK19B-204ENST00000512515 211 ntBASIC16.45■□□□□ 0.22
PRDM9Q9NQV7 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.45■□□□□ 0.22
PRDM9Q9NQV7 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PRDM9Q9NQV7 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.45■□□□□ 0.22
PRDM9Q9NQV7 AC116353.5-201ENST00000638148 1699 ntBASIC16.45■□□□□ 0.22
PRDM9Q9NQV7 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRDM9Q9NQV7 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRDM9Q9NQV7 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRDM9Q9NQV7 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.45■□□□□ 0.22
PRDM9Q9NQV7 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRDM9Q9NQV7 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRDM9Q9NQV7 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.45■□□□□ 0.22
PRDM9Q9NQV7 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.45■□□□□ 0.22
PRDM9Q9NQV7 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PRDM9Q9NQV7 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRDM9Q9NQV7 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
PRDM9Q9NQV7 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PRDM9Q9NQV7 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRDM9Q9NQV7 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRDM9Q9NQV7 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
PRDM9Q9NQV7 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRDM9Q9NQV7 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
PRDM9Q9NQV7 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.44■□□□□ 0.22
PRDM9Q9NQV7 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRDM9Q9NQV7 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.44■□□□□ 0.22
PRDM9Q9NQV7 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PRDM9Q9NQV7 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRDM9Q9NQV7 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.44■□□□□ 0.22
PRDM9Q9NQV7 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRDM9Q9NQV7 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRDM9Q9NQV7 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRDM9Q9NQV7 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.44■□□□□ 0.22
PRDM9Q9NQV7 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRDM9Q9NQV7 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRDM9Q9NQV7 AL020989.1-201ENST00000422979 469 ntBASIC16.44■□□□□ 0.22
PRDM9Q9NQV7 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
PRDM9Q9NQV7 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
PRDM9Q9NQV7 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.44■□□□□ 0.22
PRDM9Q9NQV7 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC16.44■□□□□ 0.22
PRDM9Q9NQV7 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRDM9Q9NQV7 AP002469.2-201ENST00000531724 424 ntBASIC16.44■□□□□ 0.22
PRDM9Q9NQV7 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.44■□□□□ 0.22
PRDM9Q9NQV7 AC064862.7-201ENST00000604520 867 ntBASIC16.44■□□□□ 0.22
PRDM9Q9NQV7 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms