Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
UPF2Q9HAU5 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
UPF2Q9HAU5 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
UPF2Q9HAU5 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
UPF2Q9HAU5 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
UPF2Q9HAU5 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
UPF2Q9HAU5 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
UPF2Q9HAU5 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
UPF2Q9HAU5 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.02
UPF2Q9HAU5 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
UPF2Q9HAU5 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.39■■□□□ 1.01
UPF2Q9HAU5 AL603756.1-201ENST00000606511 2163 ntBASIC21.39■■□□□ 1.01
UPF2Q9HAU5 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
UPF2Q9HAU5 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC21.39■■□□□ 1.01
UPF2Q9HAU5 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
UPF2Q9HAU5 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC21.39■■□□□ 1.01
UPF2Q9HAU5 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.39■■□□□ 1.01
UPF2Q9HAU5 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.39■■□□□ 1.01
UPF2Q9HAU5 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC21.39■■□□□ 1.01
UPF2Q9HAU5 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
UPF2Q9HAU5 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.39■■□□□ 1.01
UPF2Q9HAU5 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.39■■□□□ 1.01
UPF2Q9HAU5 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC21.39■■□□□ 1.01
UPF2Q9HAU5 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC21.39■■□□□ 1.01
UPF2Q9HAU5 AC009154.2-201ENST00000621177 724 ntBASIC21.39■■□□□ 1.01
UPF2Q9HAU5 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC21.39■■□□□ 1.01
UPF2Q9HAU5 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
UPF2Q9HAU5 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
UPF2Q9HAU5 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC21.39■■□□□ 1.01
UPF2Q9HAU5 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC21.39■■□□□ 1.01
UPF2Q9HAU5 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
UPF2Q9HAU5 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
UPF2Q9HAU5 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
UPF2Q9HAU5 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
UPF2Q9HAU5 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
UPF2Q9HAU5 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
UPF2Q9HAU5 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
UPF2Q9HAU5 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
UPF2Q9HAU5 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
UPF2Q9HAU5 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
UPF2Q9HAU5 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC21.38■■□□□ 1.01
UPF2Q9HAU5 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC21.38■■□□□ 1.01
UPF2Q9HAU5 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.38■■□□□ 1.01
UPF2Q9HAU5 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC21.38■■□□□ 1.01
UPF2Q9HAU5 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
UPF2Q9HAU5 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
UPF2Q9HAU5 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
UPF2Q9HAU5 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
UPF2Q9HAU5 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC21.38■■□□□ 1.01
UPF2Q9HAU5 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
UPF2Q9HAU5 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.38■■□□□ 1.01
UPF2Q9HAU5 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
UPF2Q9HAU5 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
UPF2Q9HAU5 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
UPF2Q9HAU5 GCSHP5-201ENST00000443090 522 ntBASIC21.38■■□□□ 1.01
UPF2Q9HAU5 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.38■■□□□ 1.01
UPF2Q9HAU5 AC098590.1-201ENST00000468126 897 ntBASIC21.38■■□□□ 1.01
UPF2Q9HAU5 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC21.38■■□□□ 1.01
UPF2Q9HAU5 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21.38■■□□□ 1.01
UPF2Q9HAU5 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.38■■□□□ 1.01
UPF2Q9HAU5 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.38■■□□□ 1.01
UPF2Q9HAU5 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
UPF2Q9HAU5 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
UPF2Q9HAU5 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
UPF2Q9HAU5 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
UPF2Q9HAU5 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
UPF2Q9HAU5 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC21.38■■□□□ 1.01
UPF2Q9HAU5 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
UPF2Q9HAU5 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
UPF2Q9HAU5 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
UPF2Q9HAU5 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC21.38■■□□□ 1.01
UPF2Q9HAU5 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC21.38■■□□□ 1.01
UPF2Q9HAU5 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
UPF2Q9HAU5 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
UPF2Q9HAU5 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UPF2Q9HAU5 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UPF2Q9HAU5 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.37■■□□□ 1.01
UPF2Q9HAU5 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
UPF2Q9HAU5 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC21.37■■□□□ 1.01
UPF2Q9HAU5 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
UPF2Q9HAU5 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
UPF2Q9HAU5 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
UPF2Q9HAU5 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC21.37■■□□□ 1.01
UPF2Q9HAU5 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
UPF2Q9HAU5 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
UPF2Q9HAU5 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
UPF2Q9HAU5 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UPF2Q9HAU5 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC21.37■■□□□ 1.01
UPF2Q9HAU5 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
UPF2Q9HAU5 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
UPF2Q9HAU5 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.37■■□□□ 1.01
UPF2Q9HAU5 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC21.37■■□□□ 1.01
UPF2Q9HAU5 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC21.37■■□□□ 1.01
UPF2Q9HAU5 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.37■■□□□ 1.01
UPF2Q9HAU5 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC21.37■■□□□ 1.01
UPF2Q9HAU5 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UPF2Q9HAU5 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
UPF2Q9HAU5 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UPF2Q9HAU5 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
UPF2Q9HAU5 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms