Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TUBB1Q9H4B7 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TUBB1Q9H4B7 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.78■□□□□ 0.28
TUBB1Q9H4B7 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.78■□□□□ 0.28
TUBB1Q9H4B7 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TUBB1Q9H4B7 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TUBB1Q9H4B7 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.78■□□□□ 0.28
TUBB1Q9H4B7 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TUBB1Q9H4B7 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TUBB1Q9H4B7 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TUBB1Q9H4B7 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.77■□□□□ 0.28
TUBB1Q9H4B7 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.77■□□□□ 0.28
TUBB1Q9H4B7 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.77■□□□□ 0.28
TUBB1Q9H4B7 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.77■□□□□ 0.28
TUBB1Q9H4B7 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TUBB1Q9H4B7 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TUBB1Q9H4B7 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TUBB1Q9H4B7 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TUBB1Q9H4B7 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TUBB1Q9H4B7 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TUBB1Q9H4B7 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TUBB1Q9H4B7 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TUBB1Q9H4B7 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.77■□□□□ 0.28
TUBB1Q9H4B7 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.77■□□□□ 0.28
TUBB1Q9H4B7 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TUBB1Q9H4B7 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
TUBB1Q9H4B7 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
TUBB1Q9H4B7 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TUBB1Q9H4B7 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.77■□□□□ 0.28
TUBB1Q9H4B7 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.77■□□□□ 0.28
TUBB1Q9H4B7 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.77■□□□□ 0.28
TUBB1Q9H4B7 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.77■□□□□ 0.28
TUBB1Q9H4B7 STK25P1-201ENST00000585406 838 ntBASIC16.77■□□□□ 0.28
TUBB1Q9H4B7 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
TUBB1Q9H4B7 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.77■□□□□ 0.28
TUBB1Q9H4B7 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.77■□□□□ 0.28
TUBB1Q9H4B7 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TUBB1Q9H4B7 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TUBB1Q9H4B7 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
TUBB1Q9H4B7 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.77■□□□□ 0.27
TUBB1Q9H4B7 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.77■□□□□ 0.27
TUBB1Q9H4B7 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
TUBB1Q9H4B7 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.77■□□□□ 0.27
TUBB1Q9H4B7 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.77■□□□□ 0.27
TUBB1Q9H4B7 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TUBB1Q9H4B7 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TUBB1Q9H4B7 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TUBB1Q9H4B7 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TUBB1Q9H4B7 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
TUBB1Q9H4B7 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TUBB1Q9H4B7 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TUBB1Q9H4B7 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TUBB1Q9H4B7 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TUBB1Q9H4B7 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TUBB1Q9H4B7 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TUBB1Q9H4B7 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.76■□□□□ 0.27
TUBB1Q9H4B7 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.76■□□□□ 0.27
TUBB1Q9H4B7 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TUBB1Q9H4B7 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TUBB1Q9H4B7 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TUBB1Q9H4B7 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TUBB1Q9H4B7 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TUBB1Q9H4B7 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TUBB1Q9H4B7 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TUBB1Q9H4B7 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TUBB1Q9H4B7 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.76■□□□□ 0.27
TUBB1Q9H4B7 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TUBB1Q9H4B7 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TUBB1Q9H4B7 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TUBB1Q9H4B7 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.76■□□□□ 0.27
TUBB1Q9H4B7 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TUBB1Q9H4B7 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
TUBB1Q9H4B7 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
TUBB1Q9H4B7 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TUBB1Q9H4B7 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.76■□□□□ 0.27
TUBB1Q9H4B7 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TUBB1Q9H4B7 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TUBB1Q9H4B7 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.76■□□□□ 0.27
TUBB1Q9H4B7 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TUBB1Q9H4B7 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TUBB1Q9H4B7 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.76■□□□□ 0.27
TUBB1Q9H4B7 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TUBB1Q9H4B7 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
TUBB1Q9H4B7 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TUBB1Q9H4B7 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TUBB1Q9H4B7 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
TUBB1Q9H4B7 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TUBB1Q9H4B7 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TUBB1Q9H4B7 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TUBB1Q9H4B7 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TUBB1Q9H4B7 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.75■□□□□ 0.27
TUBB1Q9H4B7 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TUBB1Q9H4B7 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.75■□□□□ 0.27
TUBB1Q9H4B7 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TUBB1Q9H4B7 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TUBB1Q9H4B7 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.75■□□□□ 0.27
TUBB1Q9H4B7 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.75■□□□□ 0.27
TUBB1Q9H4B7 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.75■□□□□ 0.27
TUBB1Q9H4B7 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TUBB1Q9H4B7 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms