Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
COMMD4Q9H0A8 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
COMMD4Q9H0A8 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
COMMD4Q9H0A8 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
COMMD4Q9H0A8 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
COMMD4Q9H0A8 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
COMMD4Q9H0A8 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.41■□□□□ 0.06
COMMD4Q9H0A8 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC15.41■□□□□ 0.06
COMMD4Q9H0A8 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC15.41■□□□□ 0.06
COMMD4Q9H0A8 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
COMMD4Q9H0A8 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
COMMD4Q9H0A8 AL139327.4-201ENST00000612362 153 ntBASIC15.41■□□□□ 0.06
COMMD4Q9H0A8 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.41■□□□□ 0.06
COMMD4Q9H0A8 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
COMMD4Q9H0A8 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
COMMD4Q9H0A8 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.41■□□□□ 0.06
COMMD4Q9H0A8 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
COMMD4Q9H0A8 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
COMMD4Q9H0A8 AC068587.6-202ENST00000641839 5619 ntBASIC15.41■□□□□ 0.06
COMMD4Q9H0A8 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
COMMD4Q9H0A8 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
COMMD4Q9H0A8 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
COMMD4Q9H0A8 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
COMMD4Q9H0A8 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
COMMD4Q9H0A8 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
COMMD4Q9H0A8 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
COMMD4Q9H0A8 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
COMMD4Q9H0A8 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
COMMD4Q9H0A8 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.41■□□□□ 0.06
COMMD4Q9H0A8 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.41■□□□□ 0.06
COMMD4Q9H0A8 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
COMMD4Q9H0A8 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COMMD4Q9H0A8 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
COMMD4Q9H0A8 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
COMMD4Q9H0A8 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COMMD4Q9H0A8 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COMMD4Q9H0A8 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC15.4■□□□□ 0.06
COMMD4Q9H0A8 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COMMD4Q9H0A8 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COMMD4Q9H0A8 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COMMD4Q9H0A8 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.4■□□□□ 0.06
COMMD4Q9H0A8 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
COMMD4Q9H0A8 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
COMMD4Q9H0A8 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
COMMD4Q9H0A8 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COMMD4Q9H0A8 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.4■□□□□ 0.06
COMMD4Q9H0A8 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
COMMD4Q9H0A8 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
COMMD4Q9H0A8 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COMMD4Q9H0A8 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.4■□□□□ 0.06
COMMD4Q9H0A8 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COMMD4Q9H0A8 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
COMMD4Q9H0A8 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
COMMD4Q9H0A8 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
COMMD4Q9H0A8 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
COMMD4Q9H0A8 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.4■□□□□ 0.06
COMMD4Q9H0A8 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COMMD4Q9H0A8 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC15.4■□□□□ 0.06
COMMD4Q9H0A8 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.4■□□□□ 0.06
COMMD4Q9H0A8 AL136038.4-201ENST00000603606 1261 ntBASIC15.4■□□□□ 0.06
COMMD4Q9H0A8 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
COMMD4Q9H0A8 AC004263.2-201ENST00000617183 678 ntBASIC15.4■□□□□ 0.06
COMMD4Q9H0A8 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
COMMD4Q9H0A8 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
COMMD4Q9H0A8 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
COMMD4Q9H0A8 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.4■□□□□ 0.06
COMMD4Q9H0A8 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COMMD4Q9H0A8 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
COMMD4Q9H0A8 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COMMD4Q9H0A8 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
COMMD4Q9H0A8 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
COMMD4Q9H0A8 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
COMMD4Q9H0A8 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
COMMD4Q9H0A8 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
COMMD4Q9H0A8 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
COMMD4Q9H0A8 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
COMMD4Q9H0A8 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.39■□□□□ 0.05
COMMD4Q9H0A8 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.39■□□□□ 0.05
COMMD4Q9H0A8 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.39■□□□□ 0.05
COMMD4Q9H0A8 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
COMMD4Q9H0A8 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
COMMD4Q9H0A8 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
COMMD4Q9H0A8 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
COMMD4Q9H0A8 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.39■□□□□ 0.05
COMMD4Q9H0A8 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC15.39■□□□□ 0.05
COMMD4Q9H0A8 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
COMMD4Q9H0A8 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
COMMD4Q9H0A8 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC15.39■□□□□ 0.05
COMMD4Q9H0A8 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.39■□□□□ 0.05
COMMD4Q9H0A8 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.39■□□□□ 0.05
COMMD4Q9H0A8 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.39■□□□□ 0.05
COMMD4Q9H0A8 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC15.39■□□□□ 0.05
COMMD4Q9H0A8 GCSHP2-201ENST00000560971 527 ntBASIC15.39■□□□□ 0.05
COMMD4Q9H0A8 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC15.39■□□□□ 0.05
COMMD4Q9H0A8 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.39■□□□□ 0.05
COMMD4Q9H0A8 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
COMMD4Q9H0A8 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
COMMD4Q9H0A8 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.39■□□□□ 0.05
COMMD4Q9H0A8 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.39■□□□□ 0.05
COMMD4Q9H0A8 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms