Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
RNF183Q96D59 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC12.95□□□□□ -0.34
RNF183Q96D59 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
RNF183Q96D59 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RNF183Q96D59 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RNF183Q96D59 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RNF183Q96D59 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RNF183Q96D59 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC12.94□□□□□ -0.34
RNF183Q96D59 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RNF183Q96D59 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RNF183Q96D59 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC12.94□□□□□ -0.34
RNF183Q96D59 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RNF183Q96D59 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RNF183Q96D59 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
RNF183Q96D59 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC12.94□□□□□ -0.34
RNF183Q96D59 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC12.94□□□□□ -0.34
RNF183Q96D59 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RNF183Q96D59 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RNF183Q96D59 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RNF183Q96D59 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RNF183Q96D59 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
RNF183Q96D59 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RNF183Q96D59 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RNF183Q96D59 AC096633.1-201ENST00000422446 749 ntBASIC12.94□□□□□ -0.34
RNF183Q96D59 ABCD1P5-201ENST00000445663 754 ntBASIC12.94□□□□□ -0.34
RNF183Q96D59 AF186996.4-201ENST00000467186 377 ntBASIC12.94□□□□□ -0.34
RNF183Q96D59 PPIE-208ENST00000470213 927 ntTSL 3 BASIC12.94□□□□□ -0.34
RNF183Q96D59 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC12.94□□□□□ -0.34
RNF183Q96D59 COX5A-202ENST00000562233 441 ntTSL 3 BASIC12.94□□□□□ -0.34
RNF183Q96D59 MTDHP3-201ENST00000594186 672 ntBASIC12.94□□□□□ -0.34
RNF183Q96D59 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC12.94□□□□□ -0.34
RNF183Q96D59 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC12.94□□□□□ -0.34
RNF183Q96D59 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC12.94□□□□□ -0.34
RNF183Q96D59 AL136379.1-201ENST00000623471 2642 ntBASIC12.94□□□□□ -0.34
RNF183Q96D59 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RNF183Q96D59 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RNF183Q96D59 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RNF183Q96D59 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RNF183Q96D59 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC12.94□□□□□ -0.34
RNF183Q96D59 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RNF183Q96D59 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
RNF183Q96D59 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RNF183Q96D59 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC12.94□□□□□ -0.34
RNF183Q96D59 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RNF183Q96D59 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RNF183Q96D59 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RNF183Q96D59 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC12.94□□□□□ -0.34
RNF183Q96D59 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RNF183Q96D59 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC12.93□□□□□ -0.34
RNF183Q96D59 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC12.93□□□□□ -0.34
RNF183Q96D59 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
RNF183Q96D59 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
RNF183Q96D59 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
RNF183Q96D59 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC12.93□□□□□ -0.34
RNF183Q96D59 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC12.93□□□□□ -0.34
RNF183Q96D59 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RNF183Q96D59 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RNF183Q96D59 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC12.93□□□□□ -0.34
RNF183Q96D59 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RNF183Q96D59 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
RNF183Q96D59 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
RNF183Q96D59 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
RNF183Q96D59 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
RNF183Q96D59 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RNF183Q96D59 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RNF183Q96D59 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RNF183Q96D59 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RNF183Q96D59 MRPL3P1-201ENST00000400109 1033 ntBASIC12.93□□□□□ -0.34
RNF183Q96D59 HIST2H3DP1-201ENST00000401004 416 ntBASIC12.93□□□□□ -0.34
RNF183Q96D59 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RNF183Q96D59 AC007967.3-201ENST00000434308 558 ntBASIC12.93□□□□□ -0.34
RNF183Q96D59 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RNF183Q96D59 SRP19-202ENST00000445150 833 ntTSL 2 BASIC12.93□□□□□ -0.34
RNF183Q96D59 RBSN-204ENST00000449050 903 ntTSL 2 BASIC12.93□□□□□ -0.34
RNF183Q96D59 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC12.93□□□□□ -0.34
RNF183Q96D59 PENK-208ENST00000523051 772 ntTSL 5 BASIC12.93□□□□□ -0.34
RNF183Q96D59 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC12.93□□□□□ -0.34
RNF183Q96D59 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC12.93□□□□□ -0.34
RNF183Q96D59 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC12.93□□□□□ -0.34
RNF183Q96D59 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RNF183Q96D59 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC12.93□□□□□ -0.34
RNF183Q96D59 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC12.93□□□□□ -0.34
RNF183Q96D59 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC12.93□□□□□ -0.34
RNF183Q96D59 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RNF183Q96D59 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RNF183Q96D59 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RNF183Q96D59 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC12.93□□□□□ -0.34
RNF183Q96D59 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
RNF183Q96D59 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC12.93□□□□□ -0.34
RNF183Q96D59 AP005117.1-201ENST00000584346 1413 ntBASIC12.93□□□□□ -0.34
RNF183Q96D59 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RNF183Q96D59 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RNF183Q96D59 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RNF183Q96D59 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
RNF183Q96D59 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
RNF183Q96D59 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RNF183Q96D59 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
RNF183Q96D59 PAN3-AS1-201ENST00000563843 1351 ntBASIC12.93□□□□□ -0.34
RNF183Q96D59 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RNF183Q96D59 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms