Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.37■□□□□ 0.53
ATP2A3Q93084 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2A3Q93084 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.37■□□□□ 0.53
ATP2A3Q93084 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.37■□□□□ 0.53
ATP2A3Q93084 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2A3Q93084 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.37■□□□□ 0.53
ATP2A3Q93084 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.37■□□□□ 0.53
ATP2A3Q93084 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2A3Q93084 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2A3Q93084 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2A3Q93084 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.37■□□□□ 0.53
ATP2A3Q93084 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2A3Q93084 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.37■□□□□ 0.53
ATP2A3Q93084 HLA-J-201ENST00000462773 1622 ntBASIC18.37■□□□□ 0.53
ATP2A3Q93084 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.37■□□□□ 0.53
ATP2A3Q93084 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.37■□□□□ 0.53
ATP2A3Q93084 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2A3Q93084 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.37■□□□□ 0.53
ATP2A3Q93084 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2A3Q93084 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.37■□□□□ 0.53
ATP2A3Q93084 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.37■□□□□ 0.53
ATP2A3Q93084 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2A3Q93084 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.37■□□□□ 0.53
ATP2A3Q93084 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2A3Q93084 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2A3Q93084 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.36■□□□□ 0.53
ATP2A3Q93084 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.36■□□□□ 0.53
ATP2A3Q93084 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2A3Q93084 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2A3Q93084 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2A3Q93084 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2A3Q93084 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
ATP2A3Q93084 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.36■□□□□ 0.53
ATP2A3Q93084 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
ATP2A3Q93084 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2A3Q93084 KRT18P13-201ENST00000400056 1290 ntBASIC18.36■□□□□ 0.53
ATP2A3Q93084 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2A3Q93084 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
ATP2A3Q93084 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
ATP2A3Q93084 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.36■□□□□ 0.53
ATP2A3Q93084 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
ATP2A3Q93084 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.36■□□□□ 0.53
ATP2A3Q93084 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.36■□□□□ 0.53
ATP2A3Q93084 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.36■□□□□ 0.53
ATP2A3Q93084 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
ATP2A3Q93084 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2A3Q93084 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2A3Q93084 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2A3Q93084 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2A3Q93084 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
ATP2A3Q93084 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2A3Q93084 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2A3Q93084 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2A3Q93084 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
ATP2A3Q93084 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2A3Q93084 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2A3Q93084 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2A3Q93084 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2A3Q93084 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
ATP2A3Q93084 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2A3Q93084 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.35■□□□□ 0.53
ATP2A3Q93084 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.35■□□□□ 0.53
ATP2A3Q93084 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
ATP2A3Q93084 AC025062.2-201ENST00000605477 670 ntBASIC18.35■□□□□ 0.53
ATP2A3Q93084 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.35■□□□□ 0.53
ATP2A3Q93084 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.35■□□□□ 0.53
ATP2A3Q93084 AP000867.4-201ENST00000641616 219 ntBASIC18.35■□□□□ 0.53
ATP2A3Q93084 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.35■□□□□ 0.53
ATP2A3Q93084 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.35■□□□□ 0.53
ATP2A3Q93084 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
ATP2A3Q93084 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2A3Q93084 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2A3Q93084 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2A3Q93084 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2A3Q93084 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2A3Q93084 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2A3Q93084 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
ATP2A3Q93084 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2A3Q93084 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2A3Q93084 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
ATP2A3Q93084 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2A3Q93084 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2A3Q93084 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2A3Q93084 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2A3Q93084 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2A3Q93084 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
ATP2A3Q93084 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.34■□□□□ 0.53
ATP2A3Q93084 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2A3Q93084 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
ATP2A3Q93084 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2A3Q93084 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2A3Q93084 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2A3Q93084 AC096633.1-201ENST00000422446 749 ntBASIC18.34■□□□□ 0.53
ATP2A3Q93084 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.34■□□□□ 0.53
ATP2A3Q93084 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.34■□□□□ 0.53
ATP2A3Q93084 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.34■□□□□ 0.53
ATP2A3Q93084 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.34■□□□□ 0.53
ATP2A3Q93084 TERC-201ENST00000602385 541 ntBASIC18.34■□□□□ 0.53
ATP2A3Q93084 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2A3Q93084 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms