Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMIM4Q8WVI0 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMIM4Q8WVI0 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC14.92□□□□□ -0.02
SMIM4Q8WVI0 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMIM4Q8WVI0 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMIM4Q8WVI0 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMIM4Q8WVI0 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SMIM4Q8WVI0 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMIM4Q8WVI0 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SMIM4Q8WVI0 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMIM4Q8WVI0 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMIM4Q8WVI0 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
SMIM4Q8WVI0 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
SMIM4Q8WVI0 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SMIM4Q8WVI0 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMIM4Q8WVI0 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SMIM4Q8WVI0 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SMIM4Q8WVI0 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.91□□□□□ -0.02
SMIM4Q8WVI0 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMIM4Q8WVI0 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMIM4Q8WVI0 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC14.91□□□□□ -0.02
SMIM4Q8WVI0 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMIM4Q8WVI0 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC14.91□□□□□ -0.02
SMIM4Q8WVI0 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC14.91□□□□□ -0.02
SMIM4Q8WVI0 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SMIM4Q8WVI0 CYGB-204ENST00000589342 815 ntTSL 3 BASIC14.91□□□□□ -0.02
SMIM4Q8WVI0 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMIM4Q8WVI0 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMIM4Q8WVI0 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.91□□□□□ -0.02
SMIM4Q8WVI0 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SMIM4Q8WVI0 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMIM4Q8WVI0 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SMIM4Q8WVI0 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMIM4Q8WVI0 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SMIM4Q8WVI0 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMIM4Q8WVI0 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SMIM4Q8WVI0 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.9□□□□□ -0.02
SMIM4Q8WVI0 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.9□□□□□ -0.02
SMIM4Q8WVI0 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMIM4Q8WVI0 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMIM4Q8WVI0 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.9□□□□□ -0.02
SMIM4Q8WVI0 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMIM4Q8WVI0 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMIM4Q8WVI0 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMIM4Q8WVI0 AC005052.1-201ENST00000625181 2492 ntBASIC14.9□□□□□ -0.02
SMIM4Q8WVI0 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMIM4Q8WVI0 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SMIM4Q8WVI0 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SMIM4Q8WVI0 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMIM4Q8WVI0 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.9□□□□□ -0.02
SMIM4Q8WVI0 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.9□□□□□ -0.02
SMIM4Q8WVI0 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.9□□□□□ -0.02
SMIM4Q8WVI0 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
SMIM4Q8WVI0 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC14.9□□□□□ -0.02
SMIM4Q8WVI0 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMIM4Q8WVI0 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
SMIM4Q8WVI0 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.9□□□□□ -0.02
SMIM4Q8WVI0 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMIM4Q8WVI0 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMIM4Q8WVI0 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMIM4Q8WVI0 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC14.9□□□□□ -0.02
SMIM4Q8WVI0 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SMIM4Q8WVI0 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC14.9□□□□□ -0.02
SMIM4Q8WVI0 GRAMD4P1-201ENST00000435181 1110 ntBASIC14.9□□□□□ -0.02
SMIM4Q8WVI0 AC113404.2-201ENST00000507884 177 ntBASIC14.9□□□□□ -0.02
SMIM4Q8WVI0 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.9□□□□□ -0.02
SMIM4Q8WVI0 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC14.9□□□□□ -0.02
SMIM4Q8WVI0 AC142086.2-201ENST00000569753 217 ntBASIC14.9□□□□□ -0.02
SMIM4Q8WVI0 RPS15-203ENST00000586096 570 ntTSL 2 BASIC14.9□□□□□ -0.02
SMIM4Q8WVI0 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC14.9□□□□□ -0.02
SMIM4Q8WVI0 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SMIM4Q8WVI0 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.9□□□□□ -0.02
SMIM4Q8WVI0 AC092364.2-201ENST00000596710 2692 ntBASIC14.9□□□□□ -0.02
SMIM4Q8WVI0 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMIM4Q8WVI0 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC14.9□□□□□ -0.02
SMIM4Q8WVI0 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SMIM4Q8WVI0 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SMIM4Q8WVI0 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC14.9□□□□□ -0.02
SMIM4Q8WVI0 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.9□□□□□ -0.02
SMIM4Q8WVI0 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMIM4Q8WVI0 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SMIM4Q8WVI0 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMIM4Q8WVI0 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SMIM4Q8WVI0 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SMIM4Q8WVI0 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.89□□□□□ -0.03
SMIM4Q8WVI0 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMIM4Q8WVI0 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMIM4Q8WVI0 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.89□□□□□ -0.03
SMIM4Q8WVI0 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMIM4Q8WVI0 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.89□□□□□ -0.03
SMIM4Q8WVI0 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SMIM4Q8WVI0 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.89□□□□□ -0.03
SMIM4Q8WVI0 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.89□□□□□ -0.03
SMIM4Q8WVI0 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMIM4Q8WVI0 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.89□□□□□ -0.03
SMIM4Q8WVI0 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.89□□□□□ -0.03
SMIM4Q8WVI0 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SMIM4Q8WVI0 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMIM4Q8WVI0 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SMIM4Q8WVI0 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms