Protein–RNA interactions for Protein: Q8TC12

RDH11, Retinol dehydrogenase 11, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11Q8TC12 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RDH11Q8TC12 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RDH11Q8TC12 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RDH11Q8TC12 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
RDH11Q8TC12 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
RDH11Q8TC12 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.34
RDH11Q8TC12 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
RDH11Q8TC12 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RDH11Q8TC12 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RDH11Q8TC12 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RDH11Q8TC12 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RDH11Q8TC12 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RDH11Q8TC12 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RDH11Q8TC12 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.14■□□□□ 0.33
RDH11Q8TC12 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RDH11Q8TC12 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.14■□□□□ 0.33
RDH11Q8TC12 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RDH11Q8TC12 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RDH11Q8TC12 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.14■□□□□ 0.33
RDH11Q8TC12 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RDH11Q8TC12 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RDH11Q8TC12 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RDH11Q8TC12 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.14■□□□□ 0.33
RDH11Q8TC12 HBZP1-201ENST00000354915 429 ntBASIC17.14■□□□□ 0.33
RDH11Q8TC12 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RDH11Q8TC12 YBX1P2-201ENST00000489612 999 ntBASIC17.14■□□□□ 0.33
RDH11Q8TC12 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.14■□□□□ 0.33
RDH11Q8TC12 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.14■□□□□ 0.33
RDH11Q8TC12 AC109462.3-201ENST00000573934 613 ntBASIC17.14■□□□□ 0.33
RDH11Q8TC12 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.14■□□□□ 0.33
RDH11Q8TC12 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RDH11Q8TC12 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RDH11Q8TC12 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RDH11Q8TC12 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RDH11Q8TC12 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.14■□□□□ 0.33
RDH11Q8TC12 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RDH11Q8TC12 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RDH11Q8TC12 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RDH11Q8TC12 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RDH11Q8TC12 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.14■□□□□ 0.33
RDH11Q8TC12 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
RDH11Q8TC12 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RDH11Q8TC12 AL603756.1-201ENST00000606511 2163 ntBASIC17.13■□□□□ 0.33
RDH11Q8TC12 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RDH11Q8TC12 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RDH11Q8TC12 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RDH11Q8TC12 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RDH11Q8TC12 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.13■□□□□ 0.33
RDH11Q8TC12 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.13■□□□□ 0.33
RDH11Q8TC12 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.13■□□□□ 0.33
RDH11Q8TC12 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RDH11Q8TC12 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RDH11Q8TC12 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RDH11Q8TC12 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RDH11Q8TC12 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RDH11Q8TC12 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RDH11Q8TC12 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RDH11Q8TC12 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.13■□□□□ 0.33
RDH11Q8TC12 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.13■□□□□ 0.33
RDH11Q8TC12 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RDH11Q8TC12 AC007967.3-201ENST00000434308 558 ntBASIC17.13■□□□□ 0.33
RDH11Q8TC12 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RDH11Q8TC12 AC122714.2-201ENST00000502787 707 ntBASIC17.13■□□□□ 0.33
RDH11Q8TC12 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.13■□□□□ 0.33
RDH11Q8TC12 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.13■□□□□ 0.33
RDH11Q8TC12 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.13■□□□□ 0.33
RDH11Q8TC12 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.13■□□□□ 0.33
RDH11Q8TC12 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.13■□□□□ 0.33
RDH11Q8TC12 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.13■□□□□ 0.33
RDH11Q8TC12 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.13■□□□□ 0.33
RDH11Q8TC12 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.13■□□□□ 0.33
RDH11Q8TC12 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.13■□□□□ 0.33
RDH11Q8TC12 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RDH11Q8TC12 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RDH11Q8TC12 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RDH11Q8TC12 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RDH11Q8TC12 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.13■□□□□ 0.33
RDH11Q8TC12 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RDH11Q8TC12 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RDH11Q8TC12 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RDH11Q8TC12 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RDH11Q8TC12 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RDH11Q8TC12 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RDH11Q8TC12 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RDH11Q8TC12 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.12■□□□□ 0.33
RDH11Q8TC12 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RDH11Q8TC12 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RDH11Q8TC12 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RDH11Q8TC12 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RDH11Q8TC12 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.12■□□□□ 0.33
RDH11Q8TC12 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RDH11Q8TC12 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RDH11Q8TC12 HOMER2P1-201ENST00000455653 964 ntBASIC17.12■□□□□ 0.33
RDH11Q8TC12 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.12■□□□□ 0.33
RDH11Q8TC12 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RDH11Q8TC12 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RDH11Q8TC12 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RDH11Q8TC12 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.12■□□□□ 0.33
RDH11Q8TC12 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RDH11Q8TC12 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms