Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 FAM220CP-201ENST00000395253 831 ntBASIC16.12■□□□□ 0.17
VRK2Q86Y07 SLC25A1P3-201ENST00000395415 828 ntBASIC16.12■□□□□ 0.17
VRK2Q86Y07 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.12■□□□□ 0.17
VRK2Q86Y07 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
VRK2Q86Y07 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.12■□□□□ 0.17
VRK2Q86Y07 AP005901.3-202ENST00000581653 237 ntBASIC16.12■□□□□ 0.17
VRK2Q86Y07 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
VRK2Q86Y07 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
VRK2Q86Y07 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.12■□□□□ 0.17
VRK2Q86Y07 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.12■□□□□ 0.17
VRK2Q86Y07 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VRK2Q86Y07 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VRK2Q86Y07 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VRK2Q86Y07 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VRK2Q86Y07 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
VRK2Q86Y07 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.12■□□□□ 0.17
VRK2Q86Y07 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VRK2Q86Y07 AC046185.3-201ENST00000623228 1824 ntBASIC16.12■□□□□ 0.17
VRK2Q86Y07 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VRK2Q86Y07 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
VRK2Q86Y07 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.12■□□□□ 0.17
VRK2Q86Y07 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
VRK2Q86Y07 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.11■□□□□ 0.17
VRK2Q86Y07 KRT8P10-201ENST00000450021 1447 ntBASIC16.11■□□□□ 0.17
VRK2Q86Y07 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
VRK2Q86Y07 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VRK2Q86Y07 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
VRK2Q86Y07 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
VRK2Q86Y07 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VRK2Q86Y07 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
VRK2Q86Y07 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.11■□□□□ 0.17
VRK2Q86Y07 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.11■□□□□ 0.17
VRK2Q86Y07 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VRK2Q86Y07 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VRK2Q86Y07 AC246785.2-201ENST00000432512 513 ntBASIC16.11■□□□□ 0.17
VRK2Q86Y07 FAM210CP-201ENST00000445714 574 ntBASIC16.11■□□□□ 0.17
VRK2Q86Y07 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.11■□□□□ 0.17
VRK2Q86Y07 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.11■□□□□ 0.17
VRK2Q86Y07 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.11■□□□□ 0.17
VRK2Q86Y07 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.11■□□□□ 0.17
VRK2Q86Y07 AC116407.4-201ENST00000623319 1061 ntBASIC16.11■□□□□ 0.17
VRK2Q86Y07 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
VRK2Q86Y07 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
VRK2Q86Y07 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
VRK2Q86Y07 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
VRK2Q86Y07 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VRK2Q86Y07 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.11■□□□□ 0.17
VRK2Q86Y07 AC093525.9-201ENST00000624961 1746 ntBASIC16.11■□□□□ 0.17
VRK2Q86Y07 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VRK2Q86Y07 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
VRK2Q86Y07 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VRK2Q86Y07 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VRK2Q86Y07 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
VRK2Q86Y07 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
VRK2Q86Y07 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VRK2Q86Y07 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
VRK2Q86Y07 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
VRK2Q86Y07 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.1■□□□□ 0.17
VRK2Q86Y07 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
VRK2Q86Y07 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
VRK2Q86Y07 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VRK2Q86Y07 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VRK2Q86Y07 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.1■□□□□ 0.17
VRK2Q86Y07 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.1■□□□□ 0.17
VRK2Q86Y07 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VRK2Q86Y07 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VRK2Q86Y07 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
VRK2Q86Y07 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.1■□□□□ 0.17
VRK2Q86Y07 AC103564.2-201ENST00000432853 1299 ntBASIC16.1■□□□□ 0.17
VRK2Q86Y07 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.1■□□□□ 0.17
VRK2Q86Y07 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.1■□□□□ 0.17
VRK2Q86Y07 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VRK2Q86Y07 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.1■□□□□ 0.17
VRK2Q86Y07 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.1■□□□□ 0.17
VRK2Q86Y07 AC111152.3-201ENST00000569699 673 ntBASIC16.1■□□□□ 0.17
VRK2Q86Y07 AC087388.1-201ENST00000571370 1112 ntBASIC16.1■□□□□ 0.17
VRK2Q86Y07 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.1■□□□□ 0.17
VRK2Q86Y07 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.1■□□□□ 0.17
VRK2Q86Y07 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VRK2Q86Y07 KRT18P1-202ENST00000452408 1331 ntBASIC16.1■□□□□ 0.17
VRK2Q86Y07 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VRK2Q86Y07 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VRK2Q86Y07 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VRK2Q86Y07 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.1■□□□□ 0.17
VRK2Q86Y07 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
VRK2Q86Y07 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VRK2Q86Y07 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
VRK2Q86Y07 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
VRK2Q86Y07 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VRK2Q86Y07 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
VRK2Q86Y07 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VRK2Q86Y07 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VRK2Q86Y07 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.1■□□□□ 0.17
VRK2Q86Y07 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.1■□□□□ 0.17
VRK2Q86Y07 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.1■□□□□ 0.17
VRK2Q86Y07 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
VRK2Q86Y07 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
VRK2Q86Y07 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
VRK2Q86Y07 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VRK2Q86Y07 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms