Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHD1LQ86WJ1 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
CHD1LQ86WJ1 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHD1LQ86WJ1 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC21.5■■□□□ 1.03
CHD1LQ86WJ1 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC21.5■■□□□ 1.03
CHD1LQ86WJ1 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC21.5■■□□□ 1.03
CHD1LQ86WJ1 COPS8-203ENST00000409334 794 ntTSL 5 BASIC21.5■■□□□ 1.03
CHD1LQ86WJ1 MINOS1P3-201ENST00000457048 203 ntBASIC21.5■■□□□ 1.03
CHD1LQ86WJ1 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC21.5■■□□□ 1.03
CHD1LQ86WJ1 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC21.5■■□□□ 1.03
CHD1LQ86WJ1 IL11-204ENST00000590625 1028 ntTSL 2 BASIC21.5■■□□□ 1.03
CHD1LQ86WJ1 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC21.5■■□□□ 1.03
CHD1LQ86WJ1 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
CHD1LQ86WJ1 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
CHD1LQ86WJ1 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHD1LQ86WJ1 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
CHD1LQ86WJ1 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHD1LQ86WJ1 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC21.5■■□□□ 1.03
CHD1LQ86WJ1 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHD1LQ86WJ1 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CHD1LQ86WJ1 AC005915.1-201ENST00000624912 2018 ntBASIC21.5■■□□□ 1.03
CHD1LQ86WJ1 AC105020.1-201ENST00000435356 2205 ntBASIC21.49■■□□□ 1.03
CHD1LQ86WJ1 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHD1LQ86WJ1 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CHD1LQ86WJ1 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC21.49■■□□□ 1.03
CHD1LQ86WJ1 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHD1LQ86WJ1 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHD1LQ86WJ1 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHD1LQ86WJ1 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC21.49■■□□□ 1.03
CHD1LQ86WJ1 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CHD1LQ86WJ1 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
CHD1LQ86WJ1 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
CHD1LQ86WJ1 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC21.49■■□□□ 1.03
CHD1LQ86WJ1 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC21.49■■□□□ 1.03
CHD1LQ86WJ1 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC21.49■■□□□ 1.03
CHD1LQ86WJ1 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CHD1LQ86WJ1 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CHD1LQ86WJ1 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHD1LQ86WJ1 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC21.49■■□□□ 1.03
CHD1LQ86WJ1 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC21.49■■□□□ 1.03
CHD1LQ86WJ1 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHD1LQ86WJ1 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CHD1LQ86WJ1 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHD1LQ86WJ1 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CHD1LQ86WJ1 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CHD1LQ86WJ1 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CHD1LQ86WJ1 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHD1LQ86WJ1 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC21.48■■□□□ 1.03
CHD1LQ86WJ1 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC21.48■■□□□ 1.03
CHD1LQ86WJ1 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC21.48■■□□□ 1.03
CHD1LQ86WJ1 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHD1LQ86WJ1 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CHD1LQ86WJ1 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CHD1LQ86WJ1 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CHD1LQ86WJ1 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHD1LQ86WJ1 AC003669.1-201ENST00000334569 611 ntBASIC21.48■■□□□ 1.03
CHD1LQ86WJ1 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CHD1LQ86WJ1 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC21.48■■□□□ 1.03
CHD1LQ86WJ1 KRT18P35-201ENST00000510488 1269 ntBASIC21.48■■□□□ 1.03
CHD1LQ86WJ1 AC096582.2-201ENST00000510860 516 ntBASIC21.48■■□□□ 1.03
CHD1LQ86WJ1 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC21.48■■□□□ 1.03
CHD1LQ86WJ1 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC21.48■■□□□ 1.03
CHD1LQ86WJ1 AC073592.5-201ENST00000624854 528 ntBASIC21.48■■□□□ 1.03
CHD1LQ86WJ1 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHD1LQ86WJ1 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC21.48■■□□□ 1.03
CHD1LQ86WJ1 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC21.48■■□□□ 1.03
CHD1LQ86WJ1 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHD1LQ86WJ1 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CHD1LQ86WJ1 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CHD1LQ86WJ1 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHD1LQ86WJ1 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
CHD1LQ86WJ1 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHD1LQ86WJ1 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHD1LQ86WJ1 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CHD1LQ86WJ1 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC21.47■■□□□ 1.03
CHD1LQ86WJ1 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
CHD1LQ86WJ1 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC21.47■■□□□ 1.03
CHD1LQ86WJ1 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC21.47■■□□□ 1.03
CHD1LQ86WJ1 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHD1LQ86WJ1 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CHD1LQ86WJ1 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
CHD1LQ86WJ1 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC21.47■■□□□ 1.03
CHD1LQ86WJ1 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC21.47■■□□□ 1.03
CHD1LQ86WJ1 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC21.47■■□□□ 1.03
CHD1LQ86WJ1 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC21.47■■□□□ 1.03
CHD1LQ86WJ1 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHD1LQ86WJ1 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHD1LQ86WJ1 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHD1LQ86WJ1 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CHD1LQ86WJ1 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CHD1LQ86WJ1 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CHD1LQ86WJ1 BET1L-206ENST00000486280 665 ntTSL 3 BASIC21.47■■□□□ 1.03
CHD1LQ86WJ1 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC21.47■■□□□ 1.03
CHD1LQ86WJ1 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CHD1LQ86WJ1 BCL10-202ENST00000620248 774 ntTSL 5 BASIC21.47■■□□□ 1.03
CHD1LQ86WJ1 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC21.47■■□□□ 1.03
CHD1LQ86WJ1 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHD1LQ86WJ1 EGFEM1P-202ENST00000431685 1563 ntBASIC21.47■■□□□ 1.03
CHD1LQ86WJ1 PMPCAP1-201ENST00000508114 1576 ntBASIC21.47■■□□□ 1.03
CHD1LQ86WJ1 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms