Protein–RNA interactions for Protein: Q5SQS7

SH2D4B, SH2 domain-containing protein 4B, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4BQ5SQS7 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SH2D4BQ5SQS7 AC087499.1-201ENST00000418141 1075 ntBASIC17.32■□□□□ 0.36
SH2D4BQ5SQS7 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.32■□□□□ 0.36
SH2D4BQ5SQS7 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.32■□□□□ 0.36
SH2D4BQ5SQS7 ECEL1P2-202ENST00000465689 757 ntBASIC17.32■□□□□ 0.36
SH2D4BQ5SQS7 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SH2D4BQ5SQS7 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.32■□□□□ 0.36
SH2D4BQ5SQS7 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SH2D4BQ5SQS7 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SH2D4BQ5SQS7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SH2D4BQ5SQS7 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SH2D4BQ5SQS7 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SH2D4BQ5SQS7 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SH2D4BQ5SQS7 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.32■□□□□ 0.36
SH2D4BQ5SQS7 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SH2D4BQ5SQS7 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SH2D4BQ5SQS7 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SH2D4BQ5SQS7 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.32■□□□□ 0.36
SH2D4BQ5SQS7 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SH2D4BQ5SQS7 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SH2D4BQ5SQS7 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.31■□□□□ 0.36
SH2D4BQ5SQS7 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SH2D4BQ5SQS7 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SH2D4BQ5SQS7 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SH2D4BQ5SQS7 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.31■□□□□ 0.36
SH2D4BQ5SQS7 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SH2D4BQ5SQS7 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.31■□□□□ 0.36
SH2D4BQ5SQS7 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SH2D4BQ5SQS7 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SH2D4BQ5SQS7 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SH2D4BQ5SQS7 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.31■□□□□ 0.36
SH2D4BQ5SQS7 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SH2D4BQ5SQS7 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
SH2D4BQ5SQS7 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.31■□□□□ 0.36
SH2D4BQ5SQS7 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
SH2D4BQ5SQS7 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.31■□□□□ 0.36
SH2D4BQ5SQS7 HMGA1P5-201ENST00000412453 271 ntBASIC17.31■□□□□ 0.36
SH2D4BQ5SQS7 KRT18P65-201ENST00000439811 1286 ntBASIC17.31■□□□□ 0.36
SH2D4BQ5SQS7 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.31■□□□□ 0.36
SH2D4BQ5SQS7 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SH2D4BQ5SQS7 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.31■□□□□ 0.36
SH2D4BQ5SQS7 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.31■□□□□ 0.36
SH2D4BQ5SQS7 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
SH2D4BQ5SQS7 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.31■□□□□ 0.36
SH2D4BQ5SQS7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.31■□□□□ 0.36
SH2D4BQ5SQS7 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SH2D4BQ5SQS7 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SH2D4BQ5SQS7 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SH2D4BQ5SQS7 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SH2D4BQ5SQS7 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SH2D4BQ5SQS7 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SH2D4BQ5SQS7 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.31■□□□□ 0.36
SH2D4BQ5SQS7 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SH2D4BQ5SQS7 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SH2D4BQ5SQS7 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SH2D4BQ5SQS7 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SH2D4BQ5SQS7 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SH2D4BQ5SQS7 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
SH2D4BQ5SQS7 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SH2D4BQ5SQS7 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SH2D4BQ5SQS7 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SH2D4BQ5SQS7 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SH2D4BQ5SQS7 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.3■□□□□ 0.36
SH2D4BQ5SQS7 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SH2D4BQ5SQS7 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SH2D4BQ5SQS7 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SH2D4BQ5SQS7 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.3■□□□□ 0.36
SH2D4BQ5SQS7 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SH2D4BQ5SQS7 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SH2D4BQ5SQS7 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SH2D4BQ5SQS7 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SH2D4BQ5SQS7 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SH2D4BQ5SQS7 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.3■□□□□ 0.36
SH2D4BQ5SQS7 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.3■□□□□ 0.36
SH2D4BQ5SQS7 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SH2D4BQ5SQS7 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.3■□□□□ 0.36
SH2D4BQ5SQS7 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.3■□□□□ 0.36
SH2D4BQ5SQS7 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SH2D4BQ5SQS7 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.3■□□□□ 0.36
SH2D4BQ5SQS7 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.3■□□□□ 0.36
SH2D4BQ5SQS7 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.3■□□□□ 0.36
SH2D4BQ5SQS7 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SH2D4BQ5SQS7 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SH2D4BQ5SQS7 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
SH2D4BQ5SQS7 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SH2D4BQ5SQS7 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.3■□□□□ 0.36
SH2D4BQ5SQS7 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SH2D4BQ5SQS7 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SH2D4BQ5SQS7 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.3■□□□□ 0.36
SH2D4BQ5SQS7 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SH2D4BQ5SQS7 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SH2D4BQ5SQS7 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SH2D4BQ5SQS7 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SH2D4BQ5SQS7 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SH2D4BQ5SQS7 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SH2D4BQ5SQS7 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SH2D4BQ5SQS7 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SH2D4BQ5SQS7 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SH2D4BQ5SQS7 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.29■□□□□ 0.36
SH2D4BQ5SQS7 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms