Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.48■□□□□ 0.23
RUNDC3AQ59EK9 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
RUNDC3AQ59EK9 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RUNDC3AQ59EK9 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RUNDC3AQ59EK9 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
RUNDC3AQ59EK9 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.47■□□□□ 0.23
RUNDC3AQ59EK9 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RUNDC3AQ59EK9 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.47■□□□□ 0.23
RUNDC3AQ59EK9 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
RUNDC3AQ59EK9 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RUNDC3AQ59EK9 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RUNDC3AQ59EK9 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RUNDC3AQ59EK9 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RUNDC3AQ59EK9 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RUNDC3AQ59EK9 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RUNDC3AQ59EK9 AC093827.2-201ENST00000512654 315 ntBASIC16.47■□□□□ 0.23
RUNDC3AQ59EK9 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.47■□□□□ 0.23
RUNDC3AQ59EK9 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RUNDC3AQ59EK9 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
RUNDC3AQ59EK9 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
RUNDC3AQ59EK9 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
RUNDC3AQ59EK9 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RUNDC3AQ59EK9 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RUNDC3AQ59EK9 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RUNDC3AQ59EK9 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
RUNDC3AQ59EK9 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RUNDC3AQ59EK9 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
RUNDC3AQ59EK9 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
RUNDC3AQ59EK9 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RUNDC3AQ59EK9 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.46■□□□□ 0.23
RUNDC3AQ59EK9 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RUNDC3AQ59EK9 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
RUNDC3AQ59EK9 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
RUNDC3AQ59EK9 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.46■□□□□ 0.23
RUNDC3AQ59EK9 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
RUNDC3AQ59EK9 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
RUNDC3AQ59EK9 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.46■□□□□ 0.23
RUNDC3AQ59EK9 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
RUNDC3AQ59EK9 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RUNDC3AQ59EK9 MYCLP1-201ENST00000372451 1075 ntBASIC16.46■□□□□ 0.23
RUNDC3AQ59EK9 LIN28AP1-201ENST00000429574 405 ntBASIC16.46■□□□□ 0.23
RUNDC3AQ59EK9 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RUNDC3AQ59EK9 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RUNDC3AQ59EK9 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RUNDC3AQ59EK9 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.46■□□□□ 0.23
RUNDC3AQ59EK9 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.46■□□□□ 0.23
RUNDC3AQ59EK9 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RUNDC3AQ59EK9 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.46■□□□□ 0.23
RUNDC3AQ59EK9 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.46■□□□□ 0.23
RUNDC3AQ59EK9 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RUNDC3AQ59EK9 AC019129.2-201ENST00000609837 1235 ntBASIC16.46■□□□□ 0.23
RUNDC3AQ59EK9 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.46■□□□□ 0.23
RUNDC3AQ59EK9 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.46■□□□□ 0.23
RUNDC3AQ59EK9 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RUNDC3AQ59EK9 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
RUNDC3AQ59EK9 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RUNDC3AQ59EK9 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
RUNDC3AQ59EK9 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RUNDC3AQ59EK9 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.46■□□□□ 0.23
RUNDC3AQ59EK9 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
RUNDC3AQ59EK9 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RUNDC3AQ59EK9 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RUNDC3AQ59EK9 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RUNDC3AQ59EK9 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
RUNDC3AQ59EK9 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.46■□□□□ 0.22
RUNDC3AQ59EK9 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 AC005332.3-201ENST00000589904 676 ntBASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 AL603756.1-201ENST00000606511 2163 ntBASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms