Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
ASIC1P78348 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.45■□□□□ 0.7
ASIC1P78348 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
ASIC1P78348 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.45■□□□□ 0.7
ASIC1P78348 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.45■□□□□ 0.7
ASIC1P78348 AC092329.2-201ENST00000598402 547 ntBASIC19.45■□□□□ 0.7
ASIC1P78348 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
ASIC1P78348 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
ASIC1P78348 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ASIC1P78348 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ASIC1P78348 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ASIC1P78348 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
ASIC1P78348 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ASIC1P78348 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ASIC1P78348 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ASIC1P78348 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ASIC1P78348 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.44■□□□□ 0.7
ASIC1P78348 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
ASIC1P78348 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
ASIC1P78348 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ASIC1P78348 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.44■□□□□ 0.7
ASIC1P78348 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ASIC1P78348 AC116353.5-201ENST00000638148 1699 ntBASIC19.44■□□□□ 0.7
ASIC1P78348 AL353593.2-201ENST00000602529 1483 ntBASIC19.44■□□□□ 0.7
ASIC1P78348 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ASIC1P78348 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ASIC1P78348 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ASIC1P78348 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ASIC1P78348 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ASIC1P78348 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.44■□□□□ 0.7
ASIC1P78348 RCN1P2-201ENST00000398357 915 ntBASIC19.44■□□□□ 0.7
ASIC1P78348 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
ASIC1P78348 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.44■□□□□ 0.7
ASIC1P78348 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ASIC1P78348 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.44■□□□□ 0.7
ASIC1P78348 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.44■□□□□ 0.7
ASIC1P78348 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
ASIC1P78348 STK25P1-201ENST00000585406 838 ntBASIC19.44■□□□□ 0.7
ASIC1P78348 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.44■□□□□ 0.7
ASIC1P78348 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.44■□□□□ 0.7
ASIC1P78348 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
ASIC1P78348 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ASIC1P78348 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ASIC1P78348 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ASIC1P78348 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ASIC1P78348 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ASIC1P78348 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ASIC1P78348 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ASIC1P78348 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ASIC1P78348 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ASIC1P78348 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ASIC1P78348 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.43■□□□□ 0.7
ASIC1P78348 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
ASIC1P78348 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ASIC1P78348 INTS4P1-201ENST00000438455 1935 ntBASIC19.43■□□□□ 0.7
ASIC1P78348 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ASIC1P78348 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ASIC1P78348 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ASIC1P78348 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ASIC1P78348 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.43■□□□□ 0.7
ASIC1P78348 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.43■□□□□ 0.7
ASIC1P78348 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ASIC1P78348 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ASIC1P78348 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ASIC1P78348 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ASIC1P78348 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
ASIC1P78348 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ASIC1P78348 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ASIC1P78348 AC012615.1-201ENST00000565797 1299 ntBASIC19.43■□□□□ 0.7
ASIC1P78348 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.43■□□□□ 0.7
ASIC1P78348 AC099336.1-202ENST00000602961 463 ntBASIC19.43■□□□□ 0.7
ASIC1P78348 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.43■□□□□ 0.7
ASIC1P78348 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ASIC1P78348 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ASIC1P78348 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ASIC1P78348 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ASIC1P78348 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.43■□□□□ 0.7
ASIC1P78348 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ASIC1P78348 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ASIC1P78348 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ASIC1P78348 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ASIC1P78348 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.43■□□□□ 0.7
ASIC1P78348 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
ASIC1P78348 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ASIC1P78348 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ASIC1P78348 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.42■□□□□ 0.7
ASIC1P78348 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.42■□□□□ 0.7
ASIC1P78348 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.42■□□□□ 0.7
ASIC1P78348 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ASIC1P78348 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
ASIC1P78348 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.42■□□□□ 0.7
ASIC1P78348 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.42■□□□□ 0.7
ASIC1P78348 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ASIC1P78348 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ASIC1P78348 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ASIC1P78348 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ASIC1P78348 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ASIC1P78348 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ASIC1P78348 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ASIC1P78348 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms