Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.55■□□□□ 0.72
TPM4P67936 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.55■□□□□ 0.72
TPM4P67936 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.55■□□□□ 0.72
TPM4P67936 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.55■□□□□ 0.72
TPM4P67936 AL139327.4-201ENST00000612362 153 ntBASIC19.55■□□□□ 0.72
TPM4P67936 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TPM4P67936 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM4P67936 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM4P67936 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC19.55■□□□□ 0.72
TPM4P67936 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TPM4P67936 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM4P67936 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM4P67936 AL162727.3-201ENST00000635661 2787 ntBASIC19.55■□□□□ 0.72
TPM4P67936 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TPM4P67936 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TPM4P67936 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TPM4P67936 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TPM4P67936 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TPM4P67936 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.54■□□□□ 0.72
TPM4P67936 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.54■□□□□ 0.72
TPM4P67936 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TPM4P67936 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TPM4P67936 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TPM4P67936 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TPM4P67936 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.54■□□□□ 0.72
TPM4P67936 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.54■□□□□ 0.72
TPM4P67936 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.54■□□□□ 0.72
TPM4P67936 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.54■□□□□ 0.72
TPM4P67936 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.54■□□□□ 0.72
TPM4P67936 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.54■□□□□ 0.72
TPM4P67936 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.54■□□□□ 0.72
TPM4P67936 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.54■□□□□ 0.72
TPM4P67936 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.54■□□□□ 0.72
TPM4P67936 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.54■□□□□ 0.72
TPM4P67936 AC009154.2-201ENST00000621177 724 ntBASIC19.54■□□□□ 0.72
TPM4P67936 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TPM4P67936 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TPM4P67936 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TPM4P67936 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TPM4P67936 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TPM4P67936 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TPM4P67936 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TPM4P67936 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TPM4P67936 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC19.54■□□□□ 0.72
TPM4P67936 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TPM4P67936 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
TPM4P67936 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TPM4P67936 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TPM4P67936 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TPM4P67936 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TPM4P67936 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TPM4P67936 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TPM4P67936 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TPM4P67936 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
TPM4P67936 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
TPM4P67936 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.53■□□□□ 0.72
TPM4P67936 AC005915.1-201ENST00000624912 2018 ntBASIC19.53■□□□□ 0.72
TPM4P67936 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TPM4P67936 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TPM4P67936 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.53■□□□□ 0.72
TPM4P67936 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TPM4P67936 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
TPM4P67936 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
TPM4P67936 GCSHP5-201ENST00000443090 522 ntBASIC19.53■□□□□ 0.72
TPM4P67936 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
TPM4P67936 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
TPM4P67936 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.53■□□□□ 0.72
TPM4P67936 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.53■□□□□ 0.72
TPM4P67936 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.53■□□□□ 0.72
TPM4P67936 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TPM4P67936 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.53■□□□□ 0.72
TPM4P67936 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.53■□□□□ 0.72
TPM4P67936 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TPM4P67936 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TPM4P67936 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TPM4P67936 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
TPM4P67936 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TPM4P67936 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.52■□□□□ 0.72
TPM4P67936 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TPM4P67936 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TPM4P67936 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC19.52■□□□□ 0.72
TPM4P67936 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TPM4P67936 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TPM4P67936 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19.52■□□□□ 0.72
TPM4P67936 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TPM4P67936 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
TPM4P67936 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TPM4P67936 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.52■□□□□ 0.72
TPM4P67936 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TPM4P67936 LINC02012-201ENST00000608206 1725 ntBASIC19.52■□□□□ 0.72
TPM4P67936 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
TPM4P67936 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
TPM4P67936 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TPM4P67936 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TPM4P67936 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
TPM4P67936 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.52■□□□□ 0.72
TPM4P67936 AC034232.1-201ENST00000506026 1064 ntBASIC19.52■□□□□ 0.72
TPM4P67936 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.52■□□□□ 0.72
TPM4P67936 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.52■□□□□ 0.72
TPM4P67936 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms