Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC12.35□□□□□ -0.43
RPL39P62891 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC12.35□□□□□ -0.43
RPL39P62891 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC12.35□□□□□ -0.43
RPL39P62891 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC12.35□□□□□ -0.43
RPL39P62891 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RPL39P62891 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC12.35□□□□□ -0.43
RPL39P62891 AL391005.1-201ENST00000623953 2435 ntBASIC12.35□□□□□ -0.43
RPL39P62891 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC12.35□□□□□ -0.43
RPL39P62891 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
RPL39P62891 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC12.35□□□□□ -0.43
RPL39P62891 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC12.35□□□□□ -0.43
RPL39P62891 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC12.35□□□□□ -0.43
RPL39P62891 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC12.35□□□□□ -0.43
RPL39P62891 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RPL39P62891 TSPY17P-201ENST00000450329 467 ntBASIC12.35□□□□□ -0.43
RPL39P62891 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC12.35□□□□□ -0.43
RPL39P62891 AC090192.1-201ENST00000517740 490 ntBASIC12.35□□□□□ -0.43
RPL39P62891 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC12.35□□□□□ -0.43
RPL39P62891 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC12.35□□□□□ -0.43
RPL39P62891 SPIB-206ENST00000596074 847 ntTSL 2 BASIC12.35□□□□□ -0.43
RPL39P62891 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC12.35□□□□□ -0.43
RPL39P62891 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RPL39P62891 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RPL39P62891 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
RPL39P62891 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC12.35□□□□□ -0.43
RPL39P62891 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RPL39P62891 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RPL39P62891 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RPL39P62891 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC12.35□□□□□ -0.43
RPL39P62891 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RPL39P62891 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RPL39P62891 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RPL39P62891 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC12.35□□□□□ -0.43
RPL39P62891 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RPL39P62891 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
RPL39P62891 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RPL39P62891 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RPL39P62891 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC12.35□□□□□ -0.43
RPL39P62891 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC12.35□□□□□ -0.43
RPL39P62891 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC12.35□□□□□ -0.43
RPL39P62891 AL135905.2-201ENST00000584934 1404 ntBASIC12.35□□□□□ -0.43
RPL39P62891 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RPL39P62891 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RPL39P62891 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RPL39P62891 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RPL39P62891 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC12.35□□□□□ -0.43
RPL39P62891 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
RPL39P62891 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC12.35□□□□□ -0.43
RPL39P62891 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
RPL39P62891 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
RPL39P62891 AC006449.5-201ENST00000610658 2098 ntBASIC12.34□□□□□ -0.43
RPL39P62891 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RPL39P62891 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RPL39P62891 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
RPL39P62891 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC12.34□□□□□ -0.43
RPL39P62891 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RPL39P62891 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC12.34□□□□□ -0.43
RPL39P62891 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
RPL39P62891 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RPL39P62891 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC12.34□□□□□ -0.43
RPL39P62891 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC12.34□□□□□ -0.43
RPL39P62891 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
RPL39P62891 LINC00554-201ENST00000564841 3011 ntBASIC12.34□□□□□ -0.43
RPL39P62891 GCK-209ENST00000616242 2260 ntTSL 5 BASIC12.34□□□□□ -0.43
RPL39P62891 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RPL39P62891 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RPL39P62891 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
RPL39P62891 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
RPL39P62891 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RPL39P62891 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
RPL39P62891 AL596257.1-201ENST00000641463 2694 ntBASIC12.34□□□□□ -0.43
RPL39P62891 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RPL39P62891 HIST1H2APS4-201ENST00000362070 348 ntBASIC12.34□□□□□ -0.43
RPL39P62891 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
RPL39P62891 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
RPL39P62891 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RPL39P62891 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RPL39P62891 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
RPL39P62891 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RPL39P62891 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RPL39P62891 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RPL39P62891 AL355355.2-201ENST00000442321 338 ntBASIC12.34□□□□□ -0.43
RPL39P62891 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC12.34□□□□□ -0.43
RPL39P62891 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RPL39P62891 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RPL39P62891 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC12.34□□□□□ -0.43
RPL39P62891 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC12.34□□□□□ -0.43
RPL39P62891 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RPL39P62891 REXO1L10P-201ENST00000615707 1290 ntBASIC12.34□□□□□ -0.43
RPL39P62891 REXO1L12P-201ENST00000622156 912 ntBASIC12.34□□□□□ -0.43
RPL39P62891 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
RPL39P62891 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RPL39P62891 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
RPL39P62891 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RPL39P62891 AC092053.1-201ENST00000605787 1936 ntBASIC12.34□□□□□ -0.43
RPL39P62891 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
RPL39P62891 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
RPL39P62891 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RPL39P62891 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC12.34□□□□□ -0.43
RPL39P62891 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms