Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC21.24■□□□□ 0.99
PDE1AP54750 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC21.24■□□□□ 0.99
PDE1AP54750 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDE1AP54750 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDE1AP54750 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDE1AP54750 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
PDE1AP54750 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDE1AP54750 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDE1AP54750 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PDE1AP54750 LSM5-204ENST00000409909 740 ntTSL 2 BASIC21.24■□□□□ 0.99
PDE1AP54750 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PDE1AP54750 KRT18P31-201ENST00000506277 1292 ntBASIC21.24■□□□□ 0.99
PDE1AP54750 AC106795.1-205ENST00000512851 1056 ntBASIC21.24■□□□□ 0.99
PDE1AP54750 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC21.24■□□□□ 0.99
PDE1AP54750 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC21.24■□□□□ 0.99
PDE1AP54750 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PDE1AP54750 METTL23-204ENST00000586752 904 ntTSL 2 BASIC21.24■□□□□ 0.99
PDE1AP54750 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PDE1AP54750 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
PDE1AP54750 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDE1AP54750 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDE1AP54750 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDE1AP54750 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PDE1AP54750 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDE1AP54750 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC21.24■□□□□ 0.99
PDE1AP54750 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PDE1AP54750 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC21.24■□□□□ 0.99
PDE1AP54750 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDE1AP54750 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC21.23■□□□□ 0.99
PDE1AP54750 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDE1AP54750 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC21.23■□□□□ 0.99
PDE1AP54750 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC21.23■□□□□ 0.99
PDE1AP54750 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PDE1AP54750 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
PDE1AP54750 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC21.23■□□□□ 0.99
PDE1AP54750 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDE1AP54750 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PDE1AP54750 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC21.23■□□□□ 0.99
PDE1AP54750 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.23■□□□□ 0.99
PDE1AP54750 TBCB-205ENST00000585746 875 ntTSL 3 BASIC21.23■□□□□ 0.99
PDE1AP54750 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC21.23■□□□□ 0.99
PDE1AP54750 HTR7P1-202ENST00000624664 4411 ntBASIC21.23■□□□□ 0.99
PDE1AP54750 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC21.23■□□□□ 0.99
PDE1AP54750 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC21.23■□□□□ 0.99
PDE1AP54750 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PDE1AP54750 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDE1AP54750 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC21.23■□□□□ 0.99
PDE1AP54750 AC004817.3-201ENST00000602957 2129 ntBASIC21.23■□□□□ 0.99
PDE1AP54750 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDE1AP54750 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
PDE1AP54750 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDE1AP54750 EGFEM1P-202ENST00000431685 1563 ntBASIC21.23■□□□□ 0.99
PDE1AP54750 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
PDE1AP54750 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDE1AP54750 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC21.22■□□□□ 0.99
PDE1AP54750 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDE1AP54750 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PDE1AP54750 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC21.22■□□□□ 0.99
PDE1AP54750 SIGLEC30P-201ENST00000455569 941 ntBASIC21.22■□□□□ 0.99
PDE1AP54750 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PDE1AP54750 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDE1AP54750 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PDE1AP54750 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC21.22■□□□□ 0.99
PDE1AP54750 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC21.22■□□□□ 0.99
PDE1AP54750 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC21.22■□□□□ 0.99
PDE1AP54750 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDE1AP54750 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDE1AP54750 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC21.22■□□□□ 0.99
PDE1AP54750 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDE1AP54750 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC21.22■□□□□ 0.99
PDE1AP54750 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDE1AP54750 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
PDE1AP54750 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC21.22■□□□□ 0.99
PDE1AP54750 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
PDE1AP54750 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDE1AP54750 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDE1AP54750 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PDE1AP54750 NF2-208ENST00000403435 2568 ntTSL 5 BASIC21.22■□□□□ 0.99
PDE1AP54750 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC21.22■□□□□ 0.99
PDE1AP54750 AL121761.2-201ENST00000598007 1648 ntBASIC21.22■□□□□ 0.99
PDE1AP54750 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PDE1AP54750 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PDE1AP54750 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDE1AP54750 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
PDE1AP54750 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC21.21■□□□□ 0.99
PDE1AP54750 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDE1AP54750 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDE1AP54750 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDE1AP54750 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDE1AP54750 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PDE1AP54750 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC21.21■□□□□ 0.99
PDE1AP54750 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PDE1AP54750 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
PDE1AP54750 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC21.21■□□□□ 0.99
PDE1AP54750 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC21.21■□□□□ 0.99
PDE1AP54750 PRR29-207ENST00000580752 458 ntTSL 3 BASIC21.21■□□□□ 0.99
PDE1AP54750 CYB561-217ENST00000582997 877 ntTSL 5 BASIC21.21■□□□□ 0.99
PDE1AP54750 AC012313.10-201ENST00000623509 926 ntBASIC21.21■□□□□ 0.99
PDE1AP54750 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDE1AP54750 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms