Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPA3P35244 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RPA3P35244 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.63■□□□□ 0.41
RPA3P35244 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RPA3P35244 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPA3P35244 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RPA3P35244 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RPA3P35244 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RPA3P35244 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.63■□□□□ 0.41
RPA3P35244 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
RPA3P35244 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.63■□□□□ 0.41
RPA3P35244 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.63■□□□□ 0.41
RPA3P35244 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.63■□□□□ 0.41
RPA3P35244 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RPA3P35244 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPA3P35244 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.63■□□□□ 0.41
RPA3P35244 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
RPA3P35244 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPA3P35244 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPA3P35244 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
RPA3P35244 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.63■□□□□ 0.41
RPA3P35244 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RPA3P35244 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RPA3P35244 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
RPA3P35244 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPA3P35244 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.63■□□□□ 0.41
RPA3P35244 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPA3P35244 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPA3P35244 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPA3P35244 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RPA3P35244 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RPA3P35244 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPA3P35244 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPA3P35244 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
RPA3P35244 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RPA3P35244 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RPA3P35244 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPA3P35244 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPA3P35244 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RPA3P35244 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.62■□□□□ 0.41
RPA3P35244 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.62■□□□□ 0.41
RPA3P35244 KRT18P48-201ENST00000434763 852 ntBASIC17.62■□□□□ 0.41
RPA3P35244 AC083849.1-201ENST00000615227 514 ntBASIC17.62■□□□□ 0.41
RPA3P35244 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
RPA3P35244 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPA3P35244 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RPA3P35244 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPA3P35244 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPA3P35244 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.62■□□□□ 0.41
RPA3P35244 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPA3P35244 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RPA3P35244 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RPA3P35244 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.62■□□□□ 0.41
RPA3P35244 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
RPA3P35244 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
RPA3P35244 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPA3P35244 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RPA3P35244 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.62■□□□□ 0.41
RPA3P35244 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPA3P35244 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RPA3P35244 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RPA3P35244 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.61■□□□□ 0.41
RPA3P35244 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RPA3P35244 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPA3P35244 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RPA3P35244 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPA3P35244 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPA3P35244 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.61■□□□□ 0.41
RPA3P35244 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.61■□□□□ 0.41
RPA3P35244 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPA3P35244 AC046185.3-201ENST00000623228 1824 ntBASIC17.61■□□□□ 0.41
RPA3P35244 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPA3P35244 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
RPA3P35244 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPA3P35244 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.61■□□□□ 0.41
RPA3P35244 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RPA3P35244 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPA3P35244 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPA3P35244 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPA3P35244 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RPA3P35244 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.61■□□□□ 0.41
RPA3P35244 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RPA3P35244 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPA3P35244 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RPA3P35244 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.61■□□□□ 0.41
RPA3P35244 VENTXP5-201ENST00000523979 775 ntBASIC17.61■□□□□ 0.41
RPA3P35244 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.61■□□□□ 0.41
RPA3P35244 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.61■□□□□ 0.41
RPA3P35244 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.61■□□□□ 0.41
RPA3P35244 AL603756.1-201ENST00000606511 2163 ntBASIC17.61■□□□□ 0.41
RPA3P35244 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.61■□□□□ 0.41
RPA3P35244 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPA3P35244 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RPA3P35244 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.61■□□□□ 0.41
RPA3P35244 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.61■□□□□ 0.41
RPA3P35244 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPA3P35244 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RPA3P35244 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.61■□□□□ 0.41
RPA3P35244 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPA3P35244 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms