Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.119e-7■■■□□ 15.8
RPS3P23396 MRPL13-202ENST00000518696 1418 ntTSL 1 (best)12.29□□□□□ -0.449e-7■■■□□ 15.8
RPS3P23396 MRPL13-203ENST00000518918 633 ntTSL 212.22□□□□□ -0.459e-7■■■□□ 15.8
RPS3P23396 MRPL13-204ENST00000520677 500 ntTSL 33.42□□□□□ -1.869e-7■■■□□ 15.8
RPS3P23396 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.81■■□□□ 1.087e-10■■■□□ 15.8
RPS3P23396 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.73■□□□□ 0.917e-10■■■□□ 15.8
RPS3P23396 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.877e-10■■■□□ 15.8
RPS3P23396 CERS4-214ENST00000595722 1826 ntTSL 1 (best)19.37■□□□□ 0.697e-10■■■□□ 15.8
RPS3P23396 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.597e-10■■■□□ 15.8
RPS3P23396 CERS4-202ENST00000557925 2401 ntTSL 514.92□□□□□ -0.027e-10■■■□□ 15.8
RPS3P23396 MCM3-206ENST00000596983 559 ntTSL 314.61□□□□□ -0.072e-17■■■□□ 15.8
RPS3P23396 EIF3L-214ENST00000624234 2091 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.534e-8■■■□□ 15.8
RPS3P23396 EIF3L-201ENST00000381683 1599 ntTSL 2 BASIC11.28□□□□□ -0.64e-8■■■□□ 15.8
RPS3P23396 EIF3L-212ENST00000477256 1708 ntTSL 57.33□□□□□ -1.244e-8■■■□□ 15.8
RPS3P23396 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC7.27□□□□□ -1.254e-8■■■□□ 15.8
RPS3P23396 TKT-211ENST00000472528 1055 ntTSL 1 (best)14.98□□□□□ -0.016e-10■■■□□ 15.8
RPS3P23396 PRKCSH-203ENST00000586486 1613 ntTSL 1 (best)16.77■□□□□ 0.275e-11■■■□□ 15.8
RPS3P23396 MPP1-206ENST00000417435 970 ntTSL 517.2■□□□□ 0.349e-12■■■□□ 15.8
RPS3P23396 MPP1-212ENST00000475943 860 ntTSL 1 (best)13.54□□□□□ -0.249e-12■■■□□ 15.8
RPS3P23396 MPP1-207ENST00000428488 581 ntTSL 312.42□□□□□ -0.429e-12■■■□□ 15.8
RPS3P23396 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.284e-19■■■□□ 15.8
RPS3P23396 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.21■□□□□ 0.514e-19■■■□□ 15.8
RPS3P23396 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.48■□□□□ 0.394e-19■■■□□ 15.8
RPS3P23396 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.73■□□□□ 0.114e-19■■■□□ 15.8
RPS3P23396 SLBP-204ENST00000483348 1030 ntTSL 315.66■□□□□ 0.14e-19■■■□□ 15.8
RPS3P23396 SLC3A2-217ENST00000541425 595 ntTSL 510.7□□□□□ -0.72e-23■■■□□ 15.8
RPS3P23396 EIF3E-204ENST00000518442 1285 ntTSL 1 (best)8.69□□□□□ -1.022e-7■■■□□ 15.8
RPS3P23396 EIF3E-203ENST00000518345 558 ntTSL 38.66□□□□□ -1.022e-7■■■□□ 15.8
RPS3P23396 EIF3E-211ENST00000521440 746 ntTSL 1 (best)6.57□□□□□ -1.362e-7■■■□□ 15.8
RPS3P23396 EIF3E-216ENST00000522887 575 ntTSL 45.8□□□□□ -1.482e-7■■■□□ 15.8
RPS3P23396 EIF3E-202ENST00000518100 687 ntTSL 54.61□□□□□ -1.672e-7■■■□□ 15.8
RPS3P23396 EIF3E-210ENST00000521297 223 ntTSL 50.2□□□□□ -2.382e-7■■■□□ 15.8
RPS3P23396 SQSTM1-209ENST00000504627 602 ntTSL 517.34■□□□□ 0.374e-7■■■□□ 15.8
RPS3P23396 AP2M1-212ENST00000461733 1470 ntTSL 214.25□□□□□ -0.133e-8■■■□□ 15.8
RPS3P23396 AP2M1-217ENST00000476434 321 ntTSL 25.07□□□□□ -1.63e-8■■■□□ 15.8
RPS3P23396 DLGAP5-204ENST00000554067 641 ntTSL 216.2■□□□□ 0.182e-6■■■□□ 15.8
RPS3P23396 CD151-212ENST00000527341 797 ntTSL 318.03■□□□□ 0.482e-7■■■□□ 15.8
RPS3P23396 CD151-204ENST00000524748 793 ntTSL 518.03■□□□□ 0.482e-7■■■□□ 15.8
RPS3P23396 CD151-211ENST00000526693 771 ntTSL 317.77■□□□□ 0.442e-7■■■□□ 15.8
RPS3P23396 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.88■□□□□ 0.454e-9■■■□□ 15.8
RPS3P23396 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.21■□□□□ 0.674e-23■■■□□ 15.8
RPS3P23396 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.233e-23■■■□□ 15.8
RPS3P23396 SERF2-211ENST00000430901 483 ntTSL 415.34■□□□□ 0.053e-23■■■□□ 15.8
RPS3P23396 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.26■□□□□ 0.033e-23■■■□□ 15.8
RPS3P23396 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.89□□□□□ -0.033e-23■■■□□ 15.8
RPS3P23396 SERF2-212ENST00000445816 2099 ntTSL 314.73□□□□□ -0.053e-23■■■□□ 15.8
RPS3P23396 SERF2-208ENST00000409617 700 ntTSL 214.5□□□□□ -0.093e-23■■■□□ 15.8
RPS3P23396 SERF2-206ENST00000409291 807 ntTSL 3 BASIC13.5□□□□□ -0.253e-23■■■□□ 15.8
RPS3P23396 SERF2-204ENST00000402131 586 ntTSL 2 BASIC13.38□□□□□ -0.273e-23■■■□□ 15.8
RPS3P23396 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.293e-23■■■□□ 15.8
RPS3P23396 SERF2-213ENST00000448830 2792 ntTSL 213.16□□□□□ -0.33e-23■■■□□ 15.8
RPS3P23396 SERF2-205ENST00000403425 690 ntTSL 2 BASIC12.8□□□□□ -0.363e-23■■■□□ 15.8
RPS3P23396 SERF2-216ENST00000486144 1030 ntTSL 211.85□□□□□ -0.513e-23■■■□□ 15.8
RPS3P23396 SERF2-210ENST00000409960 1032 ntTSL 1 (best) BASIC11.21□□□□□ -0.613e-23■■■□□ 15.8
RPS3P23396 SERF2-202ENST00000339624 506 ntTSL 2 BASIC10.2□□□□□ -0.783e-23■■■□□ 15.8
RPS3P23396 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.092e-8■■■□□ 15.8
RPS3P23396 GPI-208ENST00000588991 2021 ntTSL 220.38■□□□□ 0.852e-8■■■□□ 15.8
RPS3P23396 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.21■□□□□ 0.022e-8■■■□□ 15.8
RPS3P23396 GPI-202ENST00000415930 4000 ntTSL 2 BASIC7.7□□□□□ -1.182e-8■■■□□ 15.8
RPS3P23396 NUCB1-212ENST00000492367 1515 ntTSL 218.93■□□□□ 0.624e-7■■■□□ 15.8
RPS3P23396 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.041e-11■■■□□ 15.8
RPS3P23396 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.39■□□□□ 0.215e-7■■■□□ 15.8
RPS3P23396 UQCRC2-203ENST00000561798 699 ntTSL 26.86□□□□□ -1.315e-13■■■□□ 15.8
RPS3P23396 TWF2-202ENST00000472755 584 ntTSL 220.29■□□□□ 0.843e-6■■■□□ 15.8
RPS3P23396 SMARCD2-205ENST00000577686 394 ntTSL 313.55□□□□□ -0.246e-16■■■□□ 15.8
RPS3P23396 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.44■□□□□ 0.061e-9■■■□□ 15.8
RPS3P23396 STT3B-202ENST00000423527 1664 ntTSL 225.62■■□□□ 1.696e-14■■■□□ 15.8
RPS3P23396 PIGT-269ENST00000640692 1948 ntTSL 517.48■□□□□ 0.399e-8■■■□□ 15.8
RPS3P23396 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.96■□□□□ 0.319e-8■■■□□ 15.8
RPS3P23396 PIGT-206ENST00000455050 1807 ntTSL 216.62■□□□□ 0.259e-8■■■□□ 15.8
RPS3P23396 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.62■□□□□ 0.259e-8■■■□□ 15.8
RPS3P23396 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.51■□□□□ 0.239e-8■■■□□ 15.8
RPS3P23396 PIGT-222ENST00000638612 2311 ntTSL 516.47■□□□□ 0.239e-8■■■□□ 15.8
RPS3P23396 PIGT-228ENST00000638714 1886 ntTSL 516.05■□□□□ 0.169e-8■■■□□ 15.8
RPS3P23396 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.83■□□□□ 0.129e-8■■■□□ 15.8
RPS3P23396 PIGT-224ENST00000638671 1944 ntTSL 215.82■□□□□ 0.129e-8■■■□□ 15.8
RPS3P23396 PIGT-232ENST00000638938 1985 ntTSL 515.77■□□□□ 0.129e-8■■■□□ 15.8
RPS3P23396 PIGT-253ENST00000640108 2109 ntTSL 515.69■□□□□ 0.19e-8■■■□□ 15.8
RPS3P23396 PIGT-256ENST00000640194 1810 ntTSL 515.43■□□□□ 0.069e-8■■■□□ 15.8
RPS3P23396 PIGT-217ENST00000638445 2088 ntTSL 215.33■□□□□ 0.049e-8■■■□□ 15.8
RPS3P23396 PIGT-252ENST00000640107 2105 ntTSL 515.3■□□□□ 0.049e-8■■■□□ 15.8
RPS3P23396 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -09e-8■■■□□ 15.8
RPS3P23396 PIGT-250ENST00000639932 2158 ntTSL 514.83□□□□□ -0.049e-8■■■□□ 15.8
RPS3P23396 PIGT-264ENST00000640585 2203 ntTSL 514.69□□□□□ -0.069e-8■■■□□ 15.8
RPS3P23396 PIGT-211ENST00000638246 2032 ntTSL 514.69□□□□□ -0.069e-8■■■□□ 15.8
RPS3P23396 PIGT-215ENST00000638387 2170 ntTSL 514.67□□□□□ -0.069e-8■■■□□ 15.8
RPS3P23396 PIGT-271ENST00000640986 2187 ntTSL 214.67□□□□□ -0.069e-8■■■□□ 15.8
RPS3P23396 PIGT-259ENST00000640272 2112 ntTSL 514.58□□□□□ -0.089e-8■■■□□ 15.8
RPS3P23396 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.42□□□□□ -0.19e-8■■■□□ 15.8
RPS3P23396 PIGT-251ENST00000639984 1965 ntTSL 514.42□□□□□ -0.19e-8■■■□□ 15.8
RPS3P23396 PIGT-272ENST00000640996 2219 ntTSL 514.12□□□□□ -0.159e-8■■■□□ 15.8
RPS3P23396 PIGT-267ENST00000640666 2502 ntTSL 514□□□□□ -0.179e-8■■■□□ 15.8
RPS3P23396 PIGT-227ENST00000638710 2327 ntTSL 513.01□□□□□ -0.339e-8■■■□□ 15.8
RPS3P23396 PIGT-231ENST00000638927 1457 ntTSL 512.97□□□□□ -0.339e-8■■■□□ 15.8
RPS3P23396 PIGT-214ENST00000638383 2235 ntTSL 512.47□□□□□ -0.419e-8■■■□□ 15.8
RPS3P23396 PIGT-261ENST00000640364 2840 ntTSL 512.37□□□□□ -0.439e-8■■■□□ 15.8
RPS3P23396 PIGT-260ENST00000640324 2098 ntTSL 512.32□□□□□ -0.449e-8■■■□□ 15.8
RPS3P23396 PIGT-263ENST00000640549 1437 ntTSL 512.29□□□□□ -0.449e-8■■■□□ 15.8
RPS3P23396 PIGT-220ENST00000638537 1902 ntTSL 512.18□□□□□ -0.469e-8■■■□□ 15.8
RPS3P23396 PIGT-236ENST00000638978 2091 ntTSL 512.15□□□□□ -0.469e-8■■■□□ 15.8
Retrieved 100 of 24,271 protein–RNA pairs in 145.6 ms