RNA–Protein interactions for RNA: ENST00000522887.1

EIF3E-216, Transcript of eukaryotic translation initiation factor 3 subunit E, human

TSL 4

Gene EIF3E, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF3E-216	ENST00000522887	AEBP2	Q6ZN18	517 aa	Predicted RBP	28.93	■■■□□ 2.22
EIF3E-216	ENST00000522887	CHIC1	Q5VXU3	224 aa		27.32	■■□□□ 1.96
EIF3E-216	ENST00000522887	SENP3	Q9H4L4	574 aa	Predicted RBP	25.02	■■□□□ 1.6
EIF3E-216	ENST00000522887	PHF23	Q9BUL5	403 aa	Predicted RBP	24.51	■■□□□ 1.51
EIF3E-216	ENST00000522887	FOXD1	Q16676	465 aa		23.23	■■□□□ 1.31
EIF3E-216	ENST00000522887	POTED	Q86YR6	584 aa		22.49	■■□□□ 1.19
EIF3E-216	ENST00000522887	MSH5	O43196	834 aa		22.16	■■□□□ 1.14
EIF3E-216	ENST00000522887	PIAS4	Q8N2W9	510 aa	Predicted RBP	21.71	■■□□□ 1.07
EIF3E-216	ENST00000522887	PLPPR3	Q6T4P5	718 aa		21.44	■■□□□ 1.02
EIF3E-216	ENST00000522887	PPP6R1	Q9UPN7	881 aa		21.18	■□□□□ 0.98
EIF3E-216	ENST00000522887	ADRA2B	P18089	450 aa		21.17	■□□□□ 0.98
EIF3E-216	ENST00000522887	DMRT2	Q9Y5R5	561 aa		19.66	■□□□□ 0.74
EIF3E-216	ENST00000522887	SCAF1	Q9H7N4	1312 aa	Known RBP	19.62	■□□□□ 0.73
EIF3E-216	ENST00000522887	MAPK8IP2	Q13387	824 aa	Predicted RBP	19.58	■□□□□ 0.72
EIF3E-216	ENST00000522887	CACNB1	Q02641	598 aa	Predicted RBP	19.39	■□□□□ 0.69
EIF3E-216	ENST00000522887	DCAF8L1	A6NGE4	600 aa		19.07	■□□□□ 0.64
EIF3E-216	ENST00000522887	RNF39	Q9H2S5	420 aa		18.73	■□□□□ 0.59
EIF3E-216	ENST00000522887	HOXD11	P31277	338 aa	Predicted RBP	18.67	■□□□□ 0.58
EIF3E-216	ENST00000522887	PPP4R3CP	Q6ZMV5	832 aa		18.65	■□□□□ 0.58
EIF3E-216	ENST00000522887	C1QBP	Q07021	282 aa	Known RBP	18.52	■□□□□ 0.56
EIF3E-216	ENST00000522887	CNKSR2	Q8WXI2	1034 aa		18.48	■□□□□ 0.55
EIF3E-216	ENST00000522887	RNF216	Q9NWF9	866 aa	Predicted RBP	18.44	■□□□□ 0.54
EIF3E-216	ENST00000522887	DNAJC5B	Q9UF47	199 aa		18.2	■□□□□ 0.5
EIF3E-216	ENST00000522887	NCBP3	Q53F19	620 aa	Known RBP	18.08	■□□□□ 0.48
EIF3E-216	ENST00000522887	KCNA4	P22459	653 aa		17.97	■□□□□ 0.47
EIF3E-216	ENST00000522887	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	17.97	■□□□□ 0.47
EIF3E-216	ENST00000522887	NPM3	O75607	178 aa	Known RBP	17.64	■□□□□ 0.41
EIF3E-216	ENST00000522887	POTEH	Q6S545	545 aa		17.57	■□□□□ 0.4
EIF3E-216	ENST00000522887	CAPN15	O75808	1086 aa		17.44	■□□□□ 0.38
EIF3E-216	ENST00000522887		U3KPZ7	1027 aa	Predicted RBP	17.35	■□□□□ 0.37
EIF3E-216	ENST00000522887	DSG3	P32926	999 aa		17.33	■□□□□ 0.36
EIF3E-216	ENST00000522887	SPINK5	Q9NQ38	1064 aa	Predicted RBP	17.27	■□□□□ 0.36
EIF3E-216	ENST00000522887	SLC4A1AP	Q9BWU0	796 aa	Known RBP	17.22	■□□□□ 0.35
EIF3E-216	ENST00000522887	APLP2	Q06481	763 aa		17.11	■□□□□ 0.33
EIF3E-216	ENST00000522887	TRH	P20396	242 aa	Predicted RBP	17	■□□□□ 0.31
EIF3E-216	ENST00000522887	ZNF219	Q9P2Y4	722 aa	Predicted RBP	16.98	■□□□□ 0.31
EIF3E-216	ENST00000522887	ABCB7	O75027	752 aa		16.91	■□□□□ 0.3
EIF3E-216	ENST00000522887	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	16.89	■□□□□ 0.29
EIF3E-216	ENST00000522887	HNRNPUL2	Q1KMD3	747 aa	Known RBP	16.89	■□□□□ 0.29
EIF3E-216	ENST00000522887	RBM42	Q9BTD8	480 aa	Known RBP	16.75	■□□□□ 0.27
EIF3E-216	ENST00000522887	SLC4A2	P04920	1241 aa		16.74	■□□□□ 0.27
EIF3E-216	ENST00000522887	SAMD1	Q6SPF0	538 aa	Predicted RBP	16.71	■□□□□ 0.27
EIF3E-216	ENST00000522887	EHMT2	Q96KQ7	1210 aa		16.67	■□□□□ 0.26
EIF3E-216	ENST00000522887	FOXD4L1	Q9NU39	408 aa		16.66	■□□□□ 0.26
EIF3E-216	ENST00000522887	CSRNP3	Q8WYN3	585 aa		16.53	■□□□□ 0.24
EIF3E-216	ENST00000522887	CHRDL2	Q6WN34	429 aa		16.51	■□□□□ 0.23
EIF3E-216	ENST00000522887	ZBTB22	O15209	634 aa		16.49	■□□□□ 0.23
EIF3E-216	ENST00000522887	MYCN	P04198	464 aa	Predicted RBP	16.42	■□□□□ 0.22
EIF3E-216	ENST00000522887	POLA2	Q14181	598 aa		16.35	■□□□□ 0.21
EIF3E-216	ENST00000522887	ATXN8OS	P0DMR3	200 aa		16.21	■□□□□ 0.19
EIF3E-216	ENST00000522887	SP7	Q8TDD2	431 aa	Predicted RBP	16.21	■□□□□ 0.19
EIF3E-216	ENST00000522887	AKT1S1	Q96B36	256 aa		16.15	■□□□□ 0.18
EIF3E-216	ENST00000522887	ZBTB12	Q9Y330	459 aa	Predicted RBP	16.12	■□□□□ 0.17
EIF3E-216	ENST00000522887	REM2	Q8IYK8	340 aa	Predicted RBP	15.94	■□□□□ 0.14
EIF3E-216	ENST00000522887	PIP4P2	Q8N4L2	257 aa		15.94	■□□□□ 0.14
EIF3E-216	ENST00000522887	HAX1	O00165	279 aa		15.93	■□□□□ 0.14
EIF3E-216	ENST00000522887	OSCAR	Q8IYS5	282 aa		15.84	■□□□□ 0.13
EIF3E-216	ENST00000522887	PITPNM1	O00562	1244 aa		15.77	■□□□□ 0.12
EIF3E-216	ENST00000522887	ATF5	Q9Y2D1	282 aa	Predicted RBP	15.74	■□□□□ 0.11
EIF3E-216	ENST00000522887	FXR2	P51116	673 aa	Known RBP eCLIP	15.72	■□□□□ 0.11
EIF3E-216	ENST00000522887	SPDYE2B	A6NHP3	402 aa		15.48	■□□□□ 0.07
EIF3E-216	ENST00000522887	SPDYE6	P0CI01	402 aa		15.48	■□□□□ 0.07
EIF3E-216	ENST00000522887	SPDYE2	Q495Y8	402 aa		15.48	■□□□□ 0.07
EIF3E-216	ENST00000522887	FBLN2	P98095	1184 aa		15.47	■□□□□ 0.07
EIF3E-216	ENST00000522887	EVX2	Q03828	476 aa		15.44	■□□□□ 0.06
EIF3E-216	ENST00000522887	PRKAR2A	P13861	404 aa	Known RBP	15.42	■□□□□ 0.06
EIF3E-216	ENST00000522887	CLEC11A	Q9Y240	323 aa		15.41	■□□□□ 0.06
EIF3E-216	ENST00000522887	SPDYE1	Q8NFV5	336 aa	Predicted RBP	15.39	■□□□□ 0.05
EIF3E-216	ENST00000522887	C19orf67	A6NJJ6	358 aa		15.25	■□□□□ 0.03
EIF3E-216	ENST00000522887	ZNF692	Q9BU19	519 aa	Predicted RBP	15.22	■□□□□ 0.03
EIF3E-216	ENST00000522887	LHX8	Q68G74	356 aa		15.2	■□□□□ 0.02
EIF3E-216	ENST00000522887	GABBR2	O75899	941 aa		15.19	■□□□□ 0.02
EIF3E-216	ENST00000522887	MKRN4P	Q13434	485 aa	Predicted RBP	15.12	■□□□□ 0.01
EIF3E-216	ENST00000522887	SSUH2	Q9Y2M2	353 aa		15.1	■□□□□ 0.01
EIF3E-216	ENST00000522887	PRR29	P0C7W0	189 aa		15.07	■□□□□ 0
EIF3E-216	ENST00000522887	CHADL	Q6NUI6	762 aa		15.05	■□□□□ -0
EIF3E-216	ENST00000522887	FKBP8	Q14318	412 aa		14.94	□□□□□ -0.02
EIF3E-216	ENST00000522887	PABPN1	Q86U42	306 aa	Known RBP eCLIP	14.93	□□□□□ -0.02
EIF3E-216	ENST00000522887	SPDYE4	A6NLX3	237 aa		14.91	□□□□□ -0.02
EIF3E-216	ENST00000522887	CD44	P16070	742 aa	Known RBP	14.91	□□□□□ -0.02
EIF3E-216	ENST00000522887	CLCN6	P51797	869 aa		14.9	□□□□□ -0.02
EIF3E-216	ENST00000522887	PLSCR2	Q9NRY7	297 aa		14.83	□□□□□ -0.04
EIF3E-216	ENST00000522887	DCBLD2	Q96PD2	775 aa		14.82	□□□□□ -0.04
EIF3E-216	ENST00000522887	FARP1	Q9Y4F1	1045 aa	Predicted RBP	14.81	□□□□□ -0.04
EIF3E-216	ENST00000522887	PROM2	Q8N271	834 aa		14.78	□□□□□ -0.04
EIF3E-216	ENST00000522887	POTEI	P0CG38	1075 aa		14.74	□□□□□ -0.05
EIF3E-216	ENST00000522887	ZRANB1	Q9UGI0	708 aa		14.62	□□□□□ -0.07
EIF3E-216	ENST00000522887	FBXO3	Q9UK99	471 aa		14.61	□□□□□ -0.07
EIF3E-216	ENST00000522887	ZNF579	Q8NAF0	562 aa	Known RBP	14.6	□□□□□ -0.07
EIF3E-216	ENST00000522887	STAG3	Q9UJ98	1225 aa		14.54	□□□□□ -0.08
EIF3E-216	ENST00000522887	PAK3	O75914	559 aa	Predicted RBP	14.53	□□□□□ -0.08
EIF3E-216	ENST00000522887	NISCH	Q9Y2I1	1504 aa		14.45	□□□□□ -0.1
EIF3E-216	ENST00000522887	GALR2	O43603	387 aa	Predicted RBP	14.42	□□□□□ -0.1
EIF3E-216	ENST00000522887	CREBZF	Q9NS37	354 aa		14.39	□□□□□ -0.11
EIF3E-216	ENST00000522887	OTUD5	Q96G74	571 aa		14.38	□□□□□ -0.11
EIF3E-216	ENST00000522887	POTEM	A6NI47	508 aa		14.35	□□□□□ -0.11
EIF3E-216	ENST00000522887	NPM1	P06748	294 aa	Known RBP eCLIP	14.32	□□□□□ -0.12
EIF3E-216	ENST00000522887	POTEG	Q6S5H5	508 aa		14.3	□□□□□ -0.12
EIF3E-216	ENST00000522887	PHF12	Q96QT6	1004 aa		14.28	□□□□□ -0.12
EIF3E-216	ENST00000522887	VASP	P50552	380 aa	Predicted RBP	14.27	□□□□□ -0.13

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